STRINGSTRING
AEF20594.1 AEF20594.1 AEF20947.1 AEF20947.1 AEF20944.1 AEF20944.1 AEF20946.1 AEF20946.1 AEF20945.1 AEF20945.1 AEF20948.1 AEF20948.1 AEF23849.1 AEF23849.1 AEF20942.1 AEF20942.1 AEF20593.1 AEF20593.1 AEF23820.1 AEF23820.1 AEF20595.1 AEF20595.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF20594.1PFAM: Protein of unknown function DUF805; KEGG: pag:PLES_06381 hypothetical protein. (329 aa)    
Predicted Functional Partners:
AEF20947.1
KEGG: pmy:Pmen_3316 RDD domain-containing protein; manually curated; PFAM: RDD.
 
    0.741
AEF20944.1
KEGG: pmy:Pmen_3319 hypothetical protein.
 
     0.738
AEF20946.1
PFAM: Protein of unknown function DUF95, transmembrane; KEGG: pmy:Pmen_3317 hypothetical protein.
 
    0.711
AEF20945.1
KEGG: pmy:Pmen_3318 hypothetical protein.
 
     0.694
AEF20948.1
PFAM: Protein of unknown function DUF975; KEGG: pmy:Pmen_3315 hypothetical protein.
 
    0.617
AEF23849.1
PFAM: Protein of unknown function DUF2339, transmembrane; KEGG: pag:PLES_55041 hypothetical protein.
  
     0.588
AEF20942.1
PFAM: Domain of unknown function DUF58; KEGG: pmy:Pmen_3321 hypothetical protein.
 
     0.583
AEF20593.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: pap:PSPA7_0799 short chain dehydrogenase/reductase family oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.574
AEF23820.1
KEGG: pmy:Pmen_4119 sensory histidine kinase CreC; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain.
  
    0.564
AEF20595.1
KEGG: psb:Psyr_4570 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00701; PFAM: Uncharacterised protein family UPF0093.
       0.560
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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