STRINGSTRING
AEF20595.1 AEF20595.1 hemH hemH hemF hemF AEF22839.1 AEF22839.1 AEF24382.1 AEF24382.1 AEF22597.1 AEF22597.1 AEF20594.1 AEF20594.1 AEF20596.1 AEF20596.1 AEF20597.1 AEF20597.1 hemE hemE erpA erpA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF20595.1KEGG: psb:Psyr_4570 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00701; PFAM: Uncharacterised protein family UPF0093. (141 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
 
  
 0.950
hemF
Coproporphyrinogen-III oxidase, aerobic; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.
 
  
 0.949
AEF22839.1
TIGRFAM: Oxygen-independent coproporphyrinogen III oxidase HemN; PFAM: HemN, C-terminal; Radical SAM; KEGG: pmy:Pmen_2613 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
    
 0.925
AEF24382.1
Magnesium chelatase; PFAM: ATPase, AAA-5; KEGG: pmy:Pmen_4585 protoporphyrin IX magnesium-chelatase; SMART: ATPase, AAA+ type, core.
     
 0.902
AEF22597.1
KEGG: pmy:Pmen_2264 hypothetical protein.
     
  0.900
AEF20594.1
PFAM: Protein of unknown function DUF805; KEGG: pag:PLES_06381 hypothetical protein.
       0.560
AEF20596.1
KEGG: pmy:Pmen_3932 hypothetical protein.
       0.525
AEF20597.1
PFAM: Protein of unknown function DUF583; KEGG: pmy:Pmen_3931 hypothetical protein.
       0.512
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
 
   
 0.468
erpA
Iron--sulfur cluster insertion protein erpA; Required for insertion of 4Fe-4S clusters for at least IspG.
       0.427
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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