STRINGSTRING
AEF20805.1 AEF20805.1 AEF20860.1 AEF20860.1 AEF24249.1 AEF24249.1 AEF20996.1 AEF20996.1 AEF22583.1 AEF22583.1 AEF20988.1 AEF20988.1 AEF22245.1 AEF22245.1 AEF20343.1 AEF20343.1 AEF20804.1 AEF20804.1 AEF22430.1 AEF22430.1 AEF24079.1 AEF24079.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF20805.1KEGG: pmy:Pmen_3740 hypothetical protein. (139 aa)    
Predicted Functional Partners:
AEF20860.1
KEGG: pmy:Pmen_0990 hypothetical protein.
  
     0.737
AEF24249.1
KEGG: pag:PLES_03031 hypothetical protein.
  
     0.677
AEF20996.1
PFAM: Outer membrane porin, bacterial; KEGG: ppg:PputGB1_4239 outer membrane porin.
  
     0.671
AEF22583.1
PFAM: Outer membrane porin, bacterial; KEGG: ppg:PputGB1_4239 outer membrane porin.
  
     0.668
AEF20988.1
KEGG: sml:Smlt4404 hypothetical protein.
  
     0.647
AEF22245.1
PFAM: Protein of unknown function DUF1883; KEGG: pfo:Pfl01_2934 hypothetical protein.
  
     0.647
AEF20343.1
PFAM: Outer membrane porin, bacterial; KEGG: pmy:Pmen_1168 outer membrane porin.
  
     0.640
AEF20804.1
KEGG: pmy:Pmen_3741 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
     
 0.633
AEF22430.1
PFAM: Outer membrane porin, bacterial; KEGG: pmy:Pmen_4332 outer membrane porin.
  
     0.632
AEF24079.1
Putative sensor with HAMP domain; PFAM: HAMP linker domain; KEGG: pmy:Pmen_0617 hypothetical protein.
  
     0.597
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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