Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF20906.1 | AEF20908.1 | Psefu_0928 | Psefu_0930 | UBA/THIF-type NAD/FAD binding protein; KEGG: pmy:Pmen_1062 molybdopterin biosynthesis protein MoeB; manually curated; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB. | Lipid A 3-O-deacylase-related protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family. | 0.573 |
| AEF20906.1 | hemA | Psefu_0928 | Psefu_0925 | UBA/THIF-type NAD/FAD binding protein; KEGG: pmy:Pmen_1062 molybdopterin biosynthesis protein MoeB; manually curated; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.650 |
| AEF20906.1 | murI | Psefu_0928 | Psefu_0929 | UBA/THIF-type NAD/FAD binding protein; KEGG: pmy:Pmen_1062 molybdopterin biosynthesis protein MoeB; manually curated; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.806 |
| AEF20906.1 | prfA | Psefu_0928 | Psefu_0926 | UBA/THIF-type NAD/FAD binding protein; KEGG: pmy:Pmen_1062 molybdopterin biosynthesis protein MoeB; manually curated; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.641 |
| AEF20906.1 | prmC | Psefu_0928 | Psefu_0927 | UBA/THIF-type NAD/FAD binding protein; KEGG: pmy:Pmen_1062 molybdopterin biosynthesis protein MoeB; manually curated; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB. | protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.806 |
| AEF20908.1 | AEF20906.1 | Psefu_0930 | Psefu_0928 | Lipid A 3-O-deacylase-related protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family. | UBA/THIF-type NAD/FAD binding protein; KEGG: pmy:Pmen_1062 molybdopterin biosynthesis protein MoeB; manually curated; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB. | 0.573 |
| AEF20908.1 | hemA | Psefu_0930 | Psefu_0925 | Lipid A 3-O-deacylase-related protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.468 |
| AEF20908.1 | murI | Psefu_0930 | Psefu_0929 | Lipid A 3-O-deacylase-related protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.573 |
| AEF20908.1 | prfA | Psefu_0930 | Psefu_0926 | Lipid A 3-O-deacylase-related protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.468 |
| AEF20908.1 | prmC | Psefu_0930 | Psefu_0927 | Lipid A 3-O-deacylase-related protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family. | protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.573 |
| AEF22422.1 | prmC | Psefu_2456 | Psefu_0927 | Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.801 |
| atpE | atpH | Psefu_4483 | Psefu_4481 | ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | 0.999 |
| atpE | prmC | Psefu_4483 | Psefu_0927 | ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.563 |
| atpH | atpE | Psefu_4481 | Psefu_4483 | ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| atpH | prmC | Psefu_4481 | Psefu_0927 | ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.544 |
| hemA | AEF20906.1 | Psefu_0925 | Psefu_0928 | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | UBA/THIF-type NAD/FAD binding protein; KEGG: pmy:Pmen_1062 molybdopterin biosynthesis protein MoeB; manually curated; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB. | 0.650 |
| hemA | AEF20908.1 | Psefu_0925 | Psefu_0930 | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | Lipid A 3-O-deacylase-related protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family. | 0.468 |
| hemA | murI | Psefu_0925 | Psefu_0929 | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.624 |
| hemA | prfA | Psefu_0925 | Psefu_0926 | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.871 |
| hemA | prmC | Psefu_0925 | Psefu_0927 | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.677 |
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