STRINGSTRING
AEF20978.1 AEF20978.1 AEF23890.1 AEF23890.1 AEF23889.1 AEF23889.1 potA-2 potA-2 AEF20068.1 AEF20068.1 AEF20069.1 AEF20069.1 AEF24088.1 AEF24088.1 AEF20690.1 AEF20690.1 AEF20979.1 AEF20979.1 AEF20980.1 AEF20980.1 AEF20067.1 AEF20067.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEF20978.1PFAM: Bacterial extracellular solute-binding, family 1; KEGG: dda:Dd703_1786 extracellular solute-binding protein family 1. (343 aa)    
Predicted Functional Partners:
AEF23890.1
PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pap:PSPA7_0749 polyamine ABC transporter permease.
 
  
 0.865
AEF23889.1
PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pmy:Pmen_4000 binding-protein-dependent transport systems inner membrane component.
 
  
 0.861
potA-2
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  
 0.815
AEF20068.1
PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN3040 polyamine ABC transporter, permease protein.
 
  
 0.703
AEF20069.1
PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pmy:Pmen_3448 binding-protein-dependent transport systems inner membrane component.
 
  
 0.626
AEF24088.1
KEGG: pst:PSPTO_2621 DNA polymerase II; PFAM: DNA-directed DNA polymerase, family B, conserved region; DNA-directed DNA polymerase, family B, exonuclease domain; SMART: DNA-directed DNA polymerase, family B.
      
 0.616
AEF20690.1
Cupin 2 conserved barrel domain protein; KEGG: pmy:Pmen_0248 XRE family transcriptional regulator; PFAM: Cupin 2, conserved barrel; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
 
   
 0.560
AEF20979.1
PFAM: Aminoglycoside phosphotransferase; KEGG: bmj:BMULJ_06072 putative homoserine kinase type II.
 
     0.550
AEF20980.1
Alanine--glyoxylate transaminase; KEGG: bav:BAV0462 decarboxylating aminotransferase; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.493
AEF20067.1
Polyamine-transporting ATPase; PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: ppf:Pput_1952 ABC transporter related; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
 
  
 0.488
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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