STRINGSTRING
kptA kptA AEF22165.1 AEF22165.1 AEF22166.1 AEF22166.1 AEF20982.1 AEF20982.1 AEF23687.1 AEF23687.1 AEF23688.1 AEF23688.1 AEF23690.1 AEF23690.1 rtcA rtcA AEF23954.1 AEF23954.1 AEF21067.1 AEF21067.1 AEF23969.1 AEF23969.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kptARNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. (179 aa)    
Predicted Functional Partners:
AEF22165.1
KEGG: pen:PSEEN2248 hypothetical protein.
 
     0.710
AEF22166.1
KEGG: pen:PSEEN2247 hypothetical protein.
  
     0.705
AEF20982.1
KEGG: pmy:Pmen_1337 Sel1 domain-containing protein; PFAM: Sel1-like; SMART: Sel1-like.
       0.682
AEF23687.1
TROVE domain-containing protein; PFAM: TROVE; KEGG: pfl:PFL_2303 60-kDa SS-A/Ro ribonucleoprotein.
  
     0.665
AEF23688.1
Protein of unknown function UPF0027; PFAM: Uncharacterised protein family UPF0027; KEGG: pmy:Pmen_1193 hypothetical protein.
 
   
 0.663
AEF23690.1
PFAM: Nucleotidyltransferase, predicted; KEGG: pmy:Pmen_1192 nucleotidyltransferase-like protein.
 
     0.624
rtcA
RNA 3'-phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing.
 
   
 0.514
AEF23954.1
PFAM: NUDIX hydrolase domain; KEGG: pen:PSEEN2060 hypothetical protein.
 
     0.506
AEF21067.1
PFAM: ADP-ribosylation/Crystallin J1; KEGG: pfo:Pfl01_3893 ADP-ribosylation/crystallin J1.
 
   
 0.484
AEF23969.1
KEGG: ssa:SSA_2198 hypothetical protein.
  
     0.467
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.