Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF21154.1 | AEF21155.1 | Psefu_1177 | Psefu_1178 | Protein of unknown function DUF6 transmembrane; PFAM: Drug/metabolite transporter; KEGG: pmy:Pmen_3089 hypothetical protein. | PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pmy:Pmen_1114 lysine exporter protein LysE/YggA. | 0.474 |
AEF21155.1 | AEF21154.1 | Psefu_1178 | Psefu_1177 | PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pmy:Pmen_1114 lysine exporter protein LysE/YggA. | Protein of unknown function DUF6 transmembrane; PFAM: Drug/metabolite transporter; KEGG: pmy:Pmen_3089 hypothetical protein. | 0.474 |
AEF21155.1 | AEF21156.1 | Psefu_1178 | Psefu_1179 | PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pmy:Pmen_1114 lysine exporter protein LysE/YggA. | Transcriptional regulator, ArgP, LysR family; KEGG: pen:PSEEN1124 chromosome replication initiation inhibitor protein; TIGRFAM: Transcription regulator ArgP; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; Belongs to the LysR transcriptional regulatory family. | 0.926 |
AEF21155.1 | AEF21157.1 | Psefu_1178 | Psefu_1180 | PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pmy:Pmen_1114 lysine exporter protein LysE/YggA. | Sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating); KEGG: pmy:Pmen_1117 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase. | 0.567 |
AEF21156.1 | AEF21155.1 | Psefu_1179 | Psefu_1178 | Transcriptional regulator, ArgP, LysR family; KEGG: pen:PSEEN1124 chromosome replication initiation inhibitor protein; TIGRFAM: Transcription regulator ArgP; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; Belongs to the LysR transcriptional regulatory family. | PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pmy:Pmen_1114 lysine exporter protein LysE/YggA. | 0.926 |
AEF21156.1 | AEF21157.1 | Psefu_1179 | Psefu_1180 | Transcriptional regulator, ArgP, LysR family; KEGG: pen:PSEEN1124 chromosome replication initiation inhibitor protein; TIGRFAM: Transcription regulator ArgP; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; Belongs to the LysR transcriptional regulatory family. | Sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating); KEGG: pmy:Pmen_1117 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase. | 0.686 |
AEF21157.1 | AEF21155.1 | Psefu_1180 | Psefu_1178 | Sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating); KEGG: pmy:Pmen_1117 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase. | PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pmy:Pmen_1114 lysine exporter protein LysE/YggA. | 0.567 |
AEF21157.1 | AEF21156.1 | Psefu_1180 | Psefu_1179 | Sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating); KEGG: pmy:Pmen_1117 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase. | Transcriptional regulator, ArgP, LysR family; KEGG: pen:PSEEN1124 chromosome replication initiation inhibitor protein; TIGRFAM: Transcription regulator ArgP; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; Belongs to the LysR transcriptional regulatory family. | 0.686 |