Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF20826.1 | AEF21160.1 | Psefu_0848 | Psefu_1183 | TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: pap:PSPA7_1187 putative metal transporting P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase. | Transcriptional regulator, ArsR family; KEGG: pag:PLES_47321 putative transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR. | 0.511 |
AEF21159.1 | AEF21160.1 | Psefu_1182 | Psefu_1183 | KEGG: pmy:Pmen_1120 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal. | Transcriptional regulator, ArsR family; KEGG: pag:PLES_47321 putative transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR. | 0.684 |
AEF21160.1 | AEF20826.1 | Psefu_1183 | Psefu_0848 | Transcriptional regulator, ArsR family; KEGG: pag:PLES_47321 putative transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR. | TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: pap:PSPA7_1187 putative metal transporting P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase. | 0.511 |
AEF21160.1 | AEF21159.1 | Psefu_1183 | Psefu_1182 | Transcriptional regulator, ArsR family; KEGG: pag:PLES_47321 putative transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR. | KEGG: pmy:Pmen_1120 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal. | 0.684 |
AEF21160.1 | AEF21161.1 | Psefu_1183 | Psefu_1184 | Transcriptional regulator, ArsR family; KEGG: pag:PLES_47321 putative transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR. | PFAM: Acyl carrier protein phosphodiesterase; KEGG: pmy:Pmen_1122 hypothetical protein. | 0.476 |
AEF21160.1 | AEF22504.1 | Psefu_1183 | Psefu_2539 | Transcriptional regulator, ArsR family; KEGG: pag:PLES_47321 putative transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR. | TIGRFAM: 2-methylisocitrate dehydratase AcnD, Fe/S-dependent; KEGG: pmy:Pmen_2082 aconitate hydratase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel. | 0.414 |
AEF21161.1 | AEF21160.1 | Psefu_1184 | Psefu_1183 | PFAM: Acyl carrier protein phosphodiesterase; KEGG: pmy:Pmen_1122 hypothetical protein. | Transcriptional regulator, ArsR family; KEGG: pag:PLES_47321 putative transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR. | 0.476 |
AEF22504.1 | AEF21160.1 | Psefu_2539 | Psefu_1183 | TIGRFAM: 2-methylisocitrate dehydratase AcnD, Fe/S-dependent; KEGG: pmy:Pmen_2082 aconitate hydratase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel. | Transcriptional regulator, ArsR family; KEGG: pag:PLES_47321 putative transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR. | 0.414 |