STRINGSTRING
AEF21255.1 AEF21255.1 AEF21256.1 AEF21256.1 AEF21257.1 AEF21257.1 AEF21260.1 AEF21260.1 AEF21261.1 AEF21261.1 AEF21258.1 AEF21258.1 AEF21259.1 AEF21259.1 AEF21262.1 AEF21262.1 AEF20317.1 AEF20317.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AEF21255.1KEGG: pst:PSPTO_3505 cytochrome b561, putative. (182 aa)    
Predicted Functional Partners:
AEF21256.1
KEGG: pfo:Pfl01_3355 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain.
       0.685
AEF21257.1
KEGG: ppf:Pput_3039 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal.
       0.675
AEF21260.1
KEGG: pfo:Pfl01_3351 TenA family transcription regulator.
       0.654
AEF21261.1
KEGG: ppu:PP_2709 long-chain-fatty-acid--CoA ligase, putative; PFAM: AMP-dependent synthetase/ligase.
       0.636
AEF21258.1
KEGG: pfo:Pfl01_3353 hypothetical protein.
       0.633
AEF21259.1
Short-chain dehydrogenase/reductase SDR; KEGG: ppf:Pput_3041 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.633
AEF21262.1
KEGG: ppw:PputW619_3314 hypothetical protein.
       0.633
AEF20317.1
HAMAP: Protein yceI; PFAM: Lipid/polyisoprenoid-binding, YceI-like; KEGG: avn:Avin_03250 YceI-like protein; SMART: Lipid/polyisoprenoid-binding, YceI-like.
 
  
 0.412
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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