STRINGSTRING
AEF21278.1 AEF21278.1 AEF21279.1 AEF21279.1 AEF21277.1 AEF21277.1 AEF21276.1 AEF21276.1 AEF21735.1 AEF21735.1 AEF22440.1 AEF22440.1 AEF21275.1 AEF21275.1 AEF20798.1 AEF20798.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
AEF21278.1AraC protein arabinose-binding/dimerization; KEGG: pau:PA14_32450 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC type, DNA binding domain. (274 aa)    
Predicted Functional Partners:
AEF21279.1
PFAM: Cupin 2, conserved barrel; KEGG: pfl:PFL_5198 hypothetical protein.
 
 
 
 0.873
AEF21277.1
TIGRFAM: Beta-ketoadipyl CoA thiolase; Thiolase; KEGG: pag:PLES_02251 beta-ketoadipyl CoA thiolase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; Belongs to the thiolase-like superfamily. Thiolase family.
       0.561
AEF21276.1
3-hydroxybutyryl-CoA epimerase; KEGG: rce:RC1_0547 peroxisomal bifunctional enzyme; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.441
AEF21735.1
Protein of unknown function DUF6 transmembrane; PFAM: Drug/metabolite transporter; KEGG: pfo:Pfl01_2490 hypothetical protein.
  
     0.426
AEF22440.1
Transcriptional regulator, AraC family; KEGG: hch:HCH_03054 AraC-type DNA-binding domain-containing protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain.
  
     0.422
AEF21275.1
PFAM: Outer membrane porin, bacterial; KEGG: pau:PA14_54520 porin.
       0.413
AEF20798.1
KEGG: ppw:PputW619_3237 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain.
  
     0.406
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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