STRINGSTRING
AEF21288.1 AEF21288.1 AEF21289.1 AEF21289.1 AEF22355.1 AEF22355.1 AEF22799.1 AEF22799.1 AEF23132.1 AEF23132.1 AEF22135.1 AEF22135.1 AEF22947.1 AEF22947.1 AEF24344.1 AEF24344.1 AEF22134.1 AEF22134.1 AEF23203.1 AEF23203.1 AEF21290.1 AEF21290.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEF21288.1RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: avn:Avin_10480 ECF sigma factor, FecI family; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2. (195 aa)    
Predicted Functional Partners:
AEF21289.1
anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: pfs:PFLU1047 putative transmembrane sensor protein.
 
 
 0.965
AEF22355.1
anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: psp:PSPPH_2748 PupR protein.
 
 
 0.832
AEF22799.1
anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: psa:PST_4175 transmembrane sensor.
 
 
 0.832
AEF23132.1
PFAM: FecR protein; KEGG: pfl:PFL_3314 sigma factor regulatory protein FecR/PupR family.
 
 
 0.831
AEF22135.1
PFAM: FecR protein; KEGG: ppg:PputGB1_3281 anti-FecI sigma factor, FecR.
 
 
 0.830
AEF22947.1
anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: atu:Atu5310 transmembrane sensor.
 
 
 0.830
AEF24344.1
anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: avn:Avin_44140 PupR/FecR-like anti-sigma factor protein.
 
 
 0.828
AEF22134.1
KEGG: ppg:PputGB1_3282 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2.
  
     0.772
AEF23203.1
PFAM: Anti sigma-E protein RseA, N-terminal; Anti sigma-E protein RseA, C-terminal; KEGG: pfo:Pfl01_1363 anti sigma-E protein, RseA.
  
 
 0.715
AEF21290.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; KEGG: pau:PA14_01870 putative TonB-dependent receptor; SMART: Secretin/TonB, short N-terminal.
 
    0.688
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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