STRINGSTRING
AEF21289.1 AEF21289.1 AEF21288.1 AEF21288.1 AEF21290.1 AEF21290.1 AEF22134.1 AEF22134.1 AEF22948.1 AEF22948.1 AEF24345.1 AEF24345.1 AEF22356.1 AEF22356.1 AEF22800.1 AEF22800.1 AEF23131.1 AEF23131.1 AEF24343.1 AEF24343.1 AEF22136.1 AEF22136.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
AEF21289.1anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: pfs:PFLU1047 putative transmembrane sensor protein. (326 aa)    
Predicted Functional Partners:
AEF21288.1
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: avn:Avin_10480 ECF sigma factor, FecI family; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2.
 
 
 0.965
AEF21290.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; KEGG: pau:PA14_01870 putative TonB-dependent receptor; SMART: Secretin/TonB, short N-terminal.
 
 
 0.838
AEF22134.1
KEGG: ppg:PputGB1_3282 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2.
 
 
 0.831
AEF22948.1
KEGG: rpe:RPE_2646 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2.
 
 
 0.831
AEF24345.1
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: avn:Avin_44150 FecI-like iron uptake RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.831
AEF22356.1
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: pfs:PFLU2787 heme uptake regulator; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.830
AEF22800.1
KEGG: psa:PST_4176 ECF subfamily RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2.
 
 
 0.830
AEF23131.1
KEGG: pfl:PFL_3313 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2.
 
 
 0.828
AEF24343.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; KEGG: ppu:PP_4217 outer membrane ferripyoverdine receptor; SMART: Secretin/TonB, short N-terminal.
 
 
 0.758
AEF22136.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; KEGG: ppg:PputGB1_3280 TonB-dependent siderophore receptor; SMART: Secretin/TonB, short N-terminal.
 
 
 0.754
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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