STRINGSTRING
AEF21357.1 AEF21357.1 AEF24077.1 AEF24077.1 AEF23693.1 AEF23693.1 AEF21619.1 AEF21619.1 AEF21169.1 AEF21169.1 AEF21327.1 AEF21327.1 AEF23227.1 AEF23227.1 AEF20895.1 AEF20895.1 AEF22405.1 AEF22405.1 AEF20342.1 AEF20342.1 AEF23157.1 AEF23157.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEF21357.1TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; KEGG: psb:Psyr_2711 GGDEF; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted. (648 aa)    
Predicted Functional Partners:
AEF24077.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver domain; PAS fold; KEGG: pmy:Pmen_0619 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; Signal transduction response regulator, receiver domain.
 
 
0.701
AEF23693.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS fold-3; PAS fold; PAS fold-4; KEGG: pmy:Pmen_0760 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif.
 
 
0.688
AEF21619.1
Diguanylate cyclase/phosphodiesterase with GAF sensor; KEGG: pst:PSPTO_4543 GAF domain/GGDEF domain/EAL domain protein; PFAM: Diguanylate phosphodiesterase, EAL domain; GAF; SMART: Diguanylate phosphodiesterase, EAL domain; GAF; Diguanylate cyclase, predicted.
 
 
0.651
AEF21169.1
KEGG: pst:PSPTO_3195 sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain.
  
 
 0.613
AEF21327.1
PAS sensor protein; TIGRFAM: PAS; PFAM: PAS fold; KEGG: pfl:PFL_0954 sensory box protein; SMART: PAC motif; PAS.
 
   0.573
AEF23227.1
Diguanylate cyclase/phosphodiesterase with extracellular sensor; TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; HAMP linker domain; KEGG: pfl:PFL_0131 GGDEF domain-containing protein; SMART: Diguanylate cyclase, predicted; HAMP linker domain; Diguanylate phosphodiesterase, EAL domain.
 
 
0.565
AEF20895.1
Diguanylate cyclase with PAS/PAC sensor; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold-3; KEGG: pmy:Pmen_1646 diguanylate cyclase with PAS/PAC sensor; SMART: Diguanylate cyclase, predicted; PAC motif; PAS.
 
0.558
AEF22405.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase; TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver domain; KEGG: shn:Shewana3_0868 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver domain.
 
 
0.558
AEF20342.1
Diguanylate cyclase with PAS/PAC sensor; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold-3; KEGG: pmy:Pmen_4307 diguanylate cyclase with PAS/PAC sensor; SMART: Diguanylate cyclase, predicted.
 
0.556
AEF23157.1
Diguanylate cyclase/phosphodiesterase with extracellular sensor; TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, EAL domain; HAMP linker domain; Diguanylate cyclase, predicted; KEGG: pmy:Pmen_1227 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; HAMP linker domain.
 
 
0.555
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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