STRINGSTRING
AEF21388.1 AEF21388.1 AEF23361.1 AEF23361.1 AEF23863.1 AEF23863.1 xseA xseA AEF21387.1 AEF21387.1 AEF21390.1 AEF21390.1 AEF24064.1 AEF24064.1 AEF21386.1 AEF21386.1 AEF24269.1 AEF24269.1 AEF22340.1 AEF22340.1 AEF20404.1 AEF20404.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEF21388.1PFAM: Peptidase M23; KEGG: pmy:Pmen_3491 peptidase M23B. (273 aa)    
Predicted Functional Partners:
AEF23361.1
Peptidase M23; KEGG: pmy:Pmen_3021 peptidase M23B; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup.
 
  
 0.810
AEF23863.1
PFAM: Peptidase M23; KEGG: pmy:Pmen_4247 peptidase M23B.
 
   
 0.770
xseA
Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.762
AEF21387.1
PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: rcu:RCOM_1911620 glutathione s-transferase, putative; Belongs to the GST superfamily.
       0.613
AEF21390.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pfo:Pfl01_2782 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.584
AEF24064.1
Cell wall hydrolase/autolysin; KEGG: pmy:Pmen_0632 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding lysin domain; SMART: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding Lysin subgroup.
 
  
 0.509
AEF21386.1
PFAM: Mechanosensitive ion channel MscS; KEGG: psa:PST_3013 mechanosensitive ion channel family protein.
 
     0.505
AEF24269.1
PFAM: ABC transporter metal-binding lipoprotein; KEGG: pmy:Pmen_4495 periplasmic solute binding protein.
 
  
 0.486
AEF22340.1
Cell wall hydrolase/autolysin; KEGG: avn:Avin_29220 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic.
 
  
 0.484
AEF20404.1
TIGRFAM: Penicillin-binding protein 1A; KEGG: pmy:Pmen_0541 1A family penicillin-binding protein; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase.
 
   
 0.478
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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