STRINGSTRING
AEF21676.1 AEF21676.1 AEF24123.1 AEF24123.1 AEF21675.1 AEF21675.1 AEF21677.1 AEF21677.1 AEF23015.1 AEF23015.1 AEF22650.1 AEF22650.1 AEF23672.1 AEF23672.1 AEF23436.1 AEF23436.1 AEF23626.1 AEF23626.1 AEF22542.1 AEF22542.1 AEF21674.1 AEF21674.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF21676.1PFAM: Outer membrane porin, bacterial; KEGG: pap:PSPA7_4765 porin. (421 aa)    
Predicted Functional Partners:
AEF24123.1
LmbE family protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: pmy:Pmen_0596 LmbE family protein.
  
     0.723
AEF21675.1
KEGG: psa:PST_4040 tricarboxylate transport protein TctC, putative.
  
    0.719
AEF21677.1
PFAM: PrpF protein; KEGG: pfl:PFL_2497 hypothetical protein.
       0.661
AEF23015.1
KEGG: pmy:Pmen_1318 hypothetical protein.
  
     0.651
AEF22650.1
KEGG: pmy:Pmen_1916 hypothetical protein.
  
     0.613
AEF23672.1
PFAM: Protein of unknown function DUF541; KEGG: pmy:Pmen_0846 hypothetical protein.
  
     0.609
AEF23436.1
KEGG: pmy:Pmen_3068 hypothetical protein.
  
     0.589
AEF23626.1
KEGG: pag:PLES_48311 hypothetical protein.
  
     0.589
AEF22542.1
KEGG: pmy:Pmen_2458 hypothetical protein.
  
     0.586
AEF21674.1
KEGG: psb:Psyr_3967 membrane protein TctB, putative.
  
    0.572
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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