STRINGSTRING
rbsD rbsD rbsK rbsK AEF21708.1 AEF21708.1 AEF21710.1 AEF21710.1 AEF21709.1 AEF21709.1 AEF22479.1 AEF22479.1 AEF20073.1 AEF20073.1 AEF24284.1 AEF24284.1 AEF21711.1 AEF21711.1 AEF22478.1 AEF22478.1 AEF20585.1 AEF20585.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rbsDD-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (134 aa)    
Predicted Functional Partners:
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 
 0.993
AEF21708.1
PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: psp:PSPPH_2125 ribose ABC transporter, periplasmic ribose-binding protein.
 
  
 0.990
AEF21710.1
Inner-membrane translocator; PFAM: ABC transporter permease; KEGG: pen:PSEEN1954 ribose ABC transporter, permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.986
AEF21709.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: ppg:PputGB1_3491 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
  
 0.975
AEF22479.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: mes:Meso_0839 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
  
 0.911
AEF20073.1
PfkB domain protein; PFAM: Carbohydrate/purine kinase; KEGG: pfo:Pfl01_4135 PfkB.
 
  
 0.883
AEF24284.1
Fructokinase; KEGG: pmy:Pmen_4474 ribokinase-like domain-containing protein; PFAM: Carbohydrate/purine kinase.
  
  
 0.843
AEF21711.1
Transcriptional regulator, LacI family; KEGG: pfl:PFL_2104 ribose operon repressor; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI.
 
  
 0.801
AEF22478.1
Inner-membrane translocator; PFAM: ABC transporter permease; KEGG: mmw:Mmwyl1_4108 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
  
     0.491
AEF20585.1
Transcriptional regulator, LacI family; TIGRFAM: D-fructose-responsive transcription factor; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; KEGG: pmy:Pmen_0785 DNA-binding transcriptional regulator FruR; SMART: HTH transcriptional regulator, LacI.
 
  
 0.456
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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