STRINGSTRING
ttcA ttcA AEF21843.1 AEF21843.1 AEF21844.1 AEF21844.1 mnmA mnmA AEF22467.1 AEF22467.1 AEF20169.1 AEF20169.1 tilS tilS AEF21845.1 AEF21845.1 AEF21841.1 AEF21841.1 AEF22464.1 AEF22464.1 tusA tusA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
ttcAtRNA 2-thiocytidine biosynthesis protein TtcA; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system. (274 aa)    
Predicted Functional Partners:
AEF21843.1
PFAM: Methyladenine glycosylase; KEGG: pmy:Pmen_2960 3-methyladenine DNA glycosylase-like protein.
  
  
 0.816
AEF21844.1
NAD-dependent deacetylase; KEGG: pst:PSPTO_1704 transcriptional regulator, Sir2 family; HAMAP: NAD-dependent histone deacetylase, silent information regulator Sir2; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2.
       0.744
mnmA
tRNA-specific 2-thiouridylase mnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
   
 
 0.676
AEF22467.1
Sulfur relay protein, TusE/DsrC/DsvC family; Part of a sulfur-relay system.
     
 0.654
AEF20169.1
KEGG: pap:PSPA7_0479 sulfur carrier protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiamineS.
  
 
 0.622
tilS
tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine.
      
 0.616
AEF21845.1
PFAM: NLP/P60; KEGG: ppw:PputW619_1227 NLP/P60 protein.
  
    0.614
AEF21841.1
KEGG: pmy:Pmen_2963 heat shock protein DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal.
  
  
 0.612
AEF22464.1
Sulfur relay protein TusD/DsrE; KEGG: pen:PSEEN2223 sulfur transfer complex subunit TusD; TIGRFAM: Sulphur relay, TusD/DsrE; PFAM: Sulphur relay, DsrE/F-like protein.
      
 0.610
tusA
Sulfurtransferase tusA; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family.
      
 0.604
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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