STRINGSTRING
AEF21846.1 AEF21846.1 AEF21845.1 AEF21845.1 AEF22340.1 AEF22340.1 AEF21843.1 AEF21843.1 AEF21844.1 AEF21844.1 AEF24064.1 AEF24064.1 ttcA ttcA mtgA mtgA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Cooccurrence
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Textmining
[Homology]
Score
AEF21846.1PFAM: NLP/P60; KEGG: pmy:Pmen_1747 NLP/P60 protein. (175 aa)    
Predicted Functional Partners:
AEF21845.1
PFAM: NLP/P60; KEGG: ppw:PputW619_1227 NLP/P60 protein.
 
    
0.593
AEF22340.1
Cell wall hydrolase/autolysin; KEGG: avn:Avin_29220 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic.
 
  
 0.524
AEF21843.1
PFAM: Methyladenine glycosylase; KEGG: pmy:Pmen_2960 3-methyladenine DNA glycosylase-like protein.
       0.480
AEF21844.1
NAD-dependent deacetylase; KEGG: pst:PSPTO_1704 transcriptional regulator, Sir2 family; HAMAP: NAD-dependent histone deacetylase, silent information regulator Sir2; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2.
       0.480
AEF24064.1
Cell wall hydrolase/autolysin; KEGG: pmy:Pmen_0632 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding lysin domain; SMART: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding Lysin subgroup.
  
  
 0.462
ttcA
tRNA 2-thiocytidine biosynthesis protein TtcA; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.
  
    0.455
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
 
   
 0.400
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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