STRINGSTRING
AEF21874.1 AEF21874.1 AEF21875.1 AEF21875.1 AEF21876.1 AEF21876.1 AEF21877.1 AEF21877.1 AEF22802.1 AEF22802.1 rlpA rlpA rlmL rlmL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEF21874.1Oligopeptidase B; KEGG: pmy:Pmen_1781 oligopeptidase B. (679 aa)    
Predicted Functional Partners:
AEF21875.1
KEGG: pmy:Pmen_1782 hypothetical protein.
       0.573
AEF21876.1
PFAM: Glutamine amidotransferase, class-II; KEGG: pmy:Pmen_1784 glutamine amidotransferase, class-II.
       0.534
AEF21877.1
KEGG: pmy:Pmen_1785 hypothetical protein.
       0.482
AEF22802.1
UPF0133 protein ybaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
  
  
 0.482
rlpA
Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
      
 0.406
rlmL
Ribosomal RNA large subunit methyltransferase L; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.
   
  
 0.403
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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