STRINGSTRING
AEF21876.1 AEF21876.1 AEF23699.1 AEF23699.1 AEF21877.1 AEF21877.1 AEF21875.1 AEF21875.1 AEF21874.1 AEF21874.1 AEF23700.1 AEF23700.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF21876.1PFAM: Glutamine amidotransferase, class-II; KEGG: pmy:Pmen_1784 glutamine amidotransferase, class-II. (258 aa)    
Predicted Functional Partners:
AEF23699.1
Methyltransferase; KEGG: pmy:Pmen_4038 methyltransferase type 12; TIGRFAM: Methyltransferase-like; PFAM: Protein of unknown function DUF2260; Methyltransferase type 12.
  
  
 0.778
AEF21877.1
KEGG: pmy:Pmen_1785 hypothetical protein.
  
    0.752
AEF21875.1
KEGG: pmy:Pmen_1782 hypothetical protein.
       0.731
AEF21874.1
Oligopeptidase B; KEGG: pmy:Pmen_1781 oligopeptidase B.
       0.534
AEF23700.1
KEGG: pmy:Pmen_4037 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03440; PFAM: Sulphatase-modifying factor.
  
  
 0.404
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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