STRINGSTRING
AEF21893.1 AEF21893.1 AEF23748.1 AEF23748.1 AEF23749.1 AEF23749.1 AEF22854.1 AEF22854.1 AEF20487.1 AEF20487.1 AEF23747.1 AEF23747.1 AEF21892.1 AEF21892.1 AEF23746.1 AEF23746.1 AEF23780.1 AEF23780.1 AEF20649.1 AEF20649.1 queF queF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
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Textmining
[Homology]
Score
AEF21893.1TIGRFAM: Competence protein ComEA, helix-hairpin-helix domain; KEGG: pmy:Pmen_1879 helix-hairpin-helix repeat-containing competence protein ComEA. (108 aa)    
Predicted Functional Partners:
AEF23748.1
PFAM: Type II secretion system F domain; KEGG: pmy:Pmen_0774 type II secretion system protein.
  
  
 0.866
AEF23749.1
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
   
  
 0.847
AEF22854.1
TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; Beta-lactamase-like; KEGG: pmy:Pmen_1611 DNA internalization-related competence protein ComEC/Rec2; SMART: Beta-lactamase-like.
  
  
 0.774
AEF20487.1
KEGG: pmy:Pmen_4301 type II secretion system protein E; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART: ATPase, AAA+ type, core.
  
  
 0.601
AEF23747.1
KEGG: pmy:Pmen_0775 type IV-A pilus assembly ATPase PilB; TIGRFAM: ATPase, type IV, pilus assembly, PilB; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal.
  
  
 0.601
AEF21892.1
Glycoside hydrolase; Manually curated; KEGG: avn:Avin_35060 glycoside hydrolase.
       0.580
AEF23746.1
PFAM: Fimbrial protein pilin; Prepilin-type cleavage/methylation, N-terminal; KEGG: sfr:Sfri_3782 methylation site containing protein; Belongs to the N-Me-Phe pilin family.
  
  
 0.554
AEF23780.1
KEGG: neu:NE1749 hypothetical protein.
  
  
 0.554
AEF20649.1
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
  
  
 0.544
queF
NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
     
 0.543
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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