node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF19989.1 | AEF22046.1 | Psefu_0002 | Psefu_2075 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; KEGG: psa:PST_2662 ATP-dependent DNA ligase. | 0.917 |
AEF19989.1 | AEF22688.1 | Psefu_0002 | Psefu_2723 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: psp:PSPPH_1647 DNA polymerase III subunit delta'. | 0.997 |
AEF19989.1 | AEF24088.1 | Psefu_0002 | Psefu_4133 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | KEGG: pst:PSPTO_2621 DNA polymerase II; PFAM: DNA-directed DNA polymerase, family B, conserved region; DNA-directed DNA polymerase, family B, exonuclease domain; SMART: DNA-directed DNA polymerase, family B. | 0.972 |
AEF19989.1 | ligA | Psefu_0002 | Psefu_2622 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.458 |
AEF19989.1 | polA | Psefu_0002 | Psefu_4313 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.998 |
AEF22045.1 | AEF22046.1 | Psefu_2074 | Psefu_2075 | Beta-lactamase domain protein; PFAM: Beta-lactamase-like; KEGG: pfs:PFLU1313 hypothetical protein. | PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; KEGG: psa:PST_2662 ATP-dependent DNA ligase. | 0.988 |
AEF22045.1 | AEF22047.1 | Psefu_2074 | Psefu_2076 | Beta-lactamase domain protein; PFAM: Beta-lactamase-like; KEGG: pfs:PFLU1313 hypothetical protein. | DEAD/H associated domain protein; KEGG: psa:PST_2663 DEAD-box ATP dependent DNA helicase; PFAM: DEAD/H associated; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal. | 0.955 |
AEF22045.1 | AEF22048.1 | Psefu_2074 | Psefu_2077 | Beta-lactamase domain protein; PFAM: Beta-lactamase-like; KEGG: pfs:PFLU1313 hypothetical protein. | Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: pmy:Pmen_2193 ICC-like putative phosphoesterase. | 0.954 |
AEF22045.1 | AEF22258.1 | Psefu_2074 | Psefu_2291 | Beta-lactamase domain protein; PFAM: Beta-lactamase-like; KEGG: pfs:PFLU1313 hypothetical protein. | KEGG: pmy:Pmen_2775 DNA topoisomerase. | 0.505 |
AEF22045.1 | polA | Psefu_2074 | Psefu_4313 | Beta-lactamase domain protein; PFAM: Beta-lactamase-like; KEGG: pfs:PFLU1313 hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.756 |
AEF22046.1 | AEF19989.1 | Psefu_2075 | Psefu_0002 | PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; KEGG: psa:PST_2662 ATP-dependent DNA ligase. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.917 |
AEF22046.1 | AEF22045.1 | Psefu_2075 | Psefu_2074 | PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; KEGG: psa:PST_2662 ATP-dependent DNA ligase. | Beta-lactamase domain protein; PFAM: Beta-lactamase-like; KEGG: pfs:PFLU1313 hypothetical protein. | 0.988 |
AEF22046.1 | AEF22047.1 | Psefu_2075 | Psefu_2076 | PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; KEGG: psa:PST_2662 ATP-dependent DNA ligase. | DEAD/H associated domain protein; KEGG: psa:PST_2663 DEAD-box ATP dependent DNA helicase; PFAM: DEAD/H associated; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal. | 0.955 |
AEF22046.1 | AEF22048.1 | Psefu_2075 | Psefu_2077 | PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; KEGG: psa:PST_2662 ATP-dependent DNA ligase. | Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: pmy:Pmen_2193 ICC-like putative phosphoesterase. | 0.981 |
AEF22046.1 | AEF22258.1 | Psefu_2075 | Psefu_2291 | PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; KEGG: psa:PST_2662 ATP-dependent DNA ligase. | KEGG: pmy:Pmen_2775 DNA topoisomerase. | 0.657 |
AEF22046.1 | AEF22688.1 | Psefu_2075 | Psefu_2723 | PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; KEGG: psa:PST_2662 ATP-dependent DNA ligase. | TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: psp:PSPPH_1647 DNA polymerase III subunit delta'. | 0.712 |
AEF22046.1 | AEF24088.1 | Psefu_2075 | Psefu_4133 | PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; KEGG: psa:PST_2662 ATP-dependent DNA ligase. | KEGG: pst:PSPTO_2621 DNA polymerase II; PFAM: DNA-directed DNA polymerase, family B, conserved region; DNA-directed DNA polymerase, family B, exonuclease domain; SMART: DNA-directed DNA polymerase, family B. | 0.723 |
AEF22046.1 | ligA | Psefu_2075 | Psefu_2622 | PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; KEGG: psa:PST_2662 ATP-dependent DNA ligase. | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.933 |
AEF22046.1 | ligB | Psefu_2075 | Psefu_0340 | PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; KEGG: psa:PST_2662 ATP-dependent DNA ligase. | DNA ligase (NAD(+)); Catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. Belongs to the NAD-dependent DNA ligase family. LigB subfamily. | 0.914 |
AEF22046.1 | polA | Psefu_2075 | Psefu_4313 | PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; KEGG: psa:PST_2662 ATP-dependent DNA ligase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.866 |