STRINGSTRING
AEF22101.1 AEF22101.1 AEF22092.1 AEF22092.1 AEF22093.1 AEF22093.1 AEF22095.1 AEF22095.1 AEF22097.1 AEF22097.1 AEF22098.1 AEF22098.1 AEF22099.1 AEF22099.1 AEF22100.1 AEF22100.1 AEF22094.1 AEF22094.1 AEF22103.1 AEF22103.1 AEF22102.1 AEF22102.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurrence
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[Homology]
Score
AEF22101.1P-type conjugative transfer ATPase TrbB; KEGG: pna:Pnap_4195 type II secretion system protein E; TIGRFAM: ATPase, P-type conjugative transfer, TrbB; PFAM: Type II secretion system protein E. (335 aa)    
Predicted Functional Partners:
AEF22092.1
Conjugation TrbI family protein; PFAM: Type IV secretion system, VirB10 / TraB / TrbI; KEGG: pna:Pnap_4203 conjugation TrbI family protein.
 
  
 0.995
AEF22093.1
KEGG: rme:Rmet_1349 conjugal transfer protein TrbG/VirB9/CagX; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer, TrbG/VirB9/CagX.
 
  
 0.995
AEF22095.1
KEGG: pna:Pnap_4200 conjugal transfer protein TrbL; TIGRFAM: Conjugal transfer, TrbL; PFAM: Conjugal transfer, TrbL/VirB6.
 
  
 0.995
AEF22097.1
TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: shn:Shewana3_1286 conjugal transfer protein TrbJ.
 
  
 0.995
AEF22098.1
KEGG: rme:Rmet_1553 conjugal transfer ATPase TrbE; PFAM: CagE, TrbE, VirB component of type IV transporter system, central domain; SMART: ATPase, AAA+ type, core.
 
  
 0.995
AEF22099.1
KEGG: ajs:Ajs_2909 putative conjugal transfer TrbD transmembrane protein.
 
  
 0.995
AEF22100.1
PFAM: Conjugal transfer,TrbC; KEGG: bpt:Bpet2207 conjugal transfer protein TrbC.
 
  
 0.995
AEF22094.1
KEGG: rme:Rmet_1348 conjugal transfer protein TrbF.
 
  
 0.994
AEF22103.1
TRAG family protein; PFAM: Ti-type conjugative transfer system, TraG-like; KEGG: pna:Pnap_4193 conjugal transfer coupling protein TraG.
 
   
 0.960
AEF22102.1
KEGG: pna:Pnap_4194 CopG/DNA-binding domain-containing protein.
 
     0.948
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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