STRINGSTRING
AEF22155.1 AEF22155.1 AEF23520.1 AEF23520.1 AEF20501.1 AEF20501.1 AEF24312.1 AEF24312.1 AEF23385.1 AEF23385.1 AEF23436.1 AEF23436.1 AEF20338.1 AEF20338.1 AEF21954.1 AEF21954.1 AEF23162.1 AEF23162.1 AEF22828.1 AEF22828.1 AEF24346.1 AEF24346.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AEF22155.1KEGG: pfs:PFLU2493 hypothetical protein. (119 aa)    
Predicted Functional Partners:
AEF23520.1
PFAM: Protein of unknown function DUF721/UPF0232; KEGG: pmy:Pmen_0929 hypothetical protein.
  
     0.743
AEF20501.1
KEGG: ppf:Pput_0610 hypothetical protein.
  
     0.704
AEF24312.1
KEGG: pmy:Pmen_4462 nucleic acid binding protein; TIGRFAM: Conserved hypothetical protein CHP02443; PFAM: Conserved hypothetical protein CHP02443.
  
     0.677
AEF23385.1
KEGG: pmy:Pmen_3044 outer membrane chaperone Skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH).
  
     0.639
AEF23436.1
KEGG: pmy:Pmen_3068 hypothetical protein.
  
     0.621
AEF20338.1
TIGRFAM: Integral membrane protein, YccS/YhfK; Integral membrane protein, YccS; KEGG: pmy:Pmen_0470 YccS/YhfK family integral membrane protein.
  
     0.610
AEF21954.1
yecA family protein; TIGRFAM: Uncharacterised protein family UPF0149; KEGG: pmy:Pmen_1811 YecA family protein; Belongs to the UPF0149 family.
  
     0.589
AEF23162.1
PFAM: Acyltransferase 3; KEGG: psa:PST_0927 putative acyltransferase.
  
     0.558
AEF22828.1
KEGG: pmy:Pmen_2601 Cbb3-type cytochrome oxidase component.
  
     0.539
AEF24346.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pmy:Pmen_0127 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.539
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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