Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF21305.1 | AEF22204.1 | Psefu_1329 | Psefu_2237 | KEGG: avn:Avin_38510 hypothetical protein. | KEGG: psb:Psyr_1123 hypothetical protein. | 0.461 |
AEF21529.1 | AEF22204.1 | Psefu_1553 | Psefu_2237 | PFAM: Protein of unknown function DUF2132; KEGG: pfs:PFLU1087A hypothetical protein. | KEGG: psb:Psyr_1123 hypothetical protein. | 0.430 |
AEF22203.1 | AEF22204.1 | Psefu_2236 | Psefu_2237 | PFAM: Glutaredoxin; KEGG: pmy:Pmen_2745 glutaredoxin. | KEGG: psb:Psyr_1123 hypothetical protein. | 0.584 |
AEF22204.1 | AEF21305.1 | Psefu_2237 | Psefu_1329 | KEGG: psb:Psyr_1123 hypothetical protein. | KEGG: avn:Avin_38510 hypothetical protein. | 0.461 |
AEF22204.1 | AEF21529.1 | Psefu_2237 | Psefu_1553 | KEGG: psb:Psyr_1123 hypothetical protein. | PFAM: Protein of unknown function DUF2132; KEGG: pfs:PFLU1087A hypothetical protein. | 0.430 |
AEF22204.1 | AEF22203.1 | Psefu_2237 | Psefu_2236 | KEGG: psb:Psyr_1123 hypothetical protein. | PFAM: Glutaredoxin; KEGG: pmy:Pmen_2745 glutaredoxin. | 0.584 |