STRINGSTRING
AEF22307.1 AEF22307.1 AEF21670.1 AEF21670.1 AEF22308.1 AEF22308.1 AEF21666.1 AEF21666.1 AEF24016.1 AEF24016.1 AEF21669.1 AEF21669.1 AEF22754.1 AEF22754.1 glgB glgB AEF24361.1 AEF24361.1 AEF21654.1 AEF21654.1 polA polA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF22307.1KEGG: pfo:Pfl01_2643 hypothetical protein. (430 aa)    
Predicted Functional Partners:
AEF21670.1
PFAM: Polysaccharide export protein; Soluble ligand binding domain; KEGG: pfo:Pfl01_2814 polysaccharide export protein.
 
  
 0.873
AEF22308.1
PFAM: Disulphide bond formation protein DsbB/BdbC; KEGG: bur:Bcep18194_A4133 disulfide bond formation protein B.
       0.805
AEF21666.1
TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate glucose phosphotransferase, WcaJ; KEGG: pfo:Pfl01_2816 sugar transferase; PFAM: Bacterial sugar transferase.
 
  
 0.790
AEF24016.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.618
AEF21669.1
Capsular exopolysaccharide family; TIGRFAM: Exopolysaccharide synthesis protein; KEGG: pfo:Pfl01_2815 lipopolysaccharide biosynthesis; PFAM: Lipopolysaccharide biosynthesis.
 
  
 0.601
AEF22754.1
Malto-oligosyltrehalose trehalohydrolase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; TIGRFAM: Malto-oligosyltrehalose trehalohydrolase; KEGG: psa:PST_2138 alpha-amylase family protein; PFAM: Glycosyl hydrolase, family 13, catalytic domain; Glycoside hydrolase, family 13, N-terminal.
   
 0.590
glgB
1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.590
AEF24361.1
KEGG: psb:Psyr_0621 hypothetical protein.
   
 
 0.560
AEF21654.1
PFAM: Polysaccharide biosynthesis protein; KEGG: mmh:Mmah_0083 polysaccharide biosynthesis protein.
 
  
 0.485
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 
 0.481
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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