STRINGSTRING
AEF22325.1 AEF22325.1 AEF22326.1 AEF22326.1 AEF22324.1 AEF22324.1 atpA atpA rplQ rplQ atpG atpG AEF22316.1 AEF22316.1 AEF21276.1 AEF21276.1 AEF20333.1 AEF20333.1 atpD atpD rpmJ rpmJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEF22325.1KEGG: xcv:XCV2088 FAD containing monooxygenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (473 aa)    
Predicted Functional Partners:
AEF22326.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: xcv:XCV2087 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.857
AEF22324.1
KEGG: xcv:XCV2086 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain.
 
     0.604
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
   
   0.548
rplQ
TIGRFAM: Ribosomal protein L17; HAMAP: Ribosomal protein L17; KEGG: pmy:Pmen_3883 50S ribosomal protein L17; PFAM: Ribosomal protein L17.
   
   0.526
atpG
ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.520
AEF22316.1
Regulatory protein TetR; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: psp:PSPPH_2733 TetR family transcriptional regulator.
  
     0.510
AEF21276.1
3-hydroxybutyryl-CoA epimerase; KEGG: rce:RC1_0547 peroxisomal bifunctional enzyme; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 
 0.498
AEF20333.1
Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
    
 
 0.495
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
   
   0.484
rpmJ
PFAM: Ribosomal protein L36; manually curated; TIGRFAM: Ribosomal protein L36; KEGG: pmy:Pmen_3888 50S ribosomal protein L36; HAMAP: Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.483
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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