STRINGSTRING
AEF22362.1 AEF22362.1 AEF22363.1 AEF22363.1 AEF22361.1 AEF22361.1 AEF22337.1 AEF22337.1 AEF22360.1 AEF22360.1 fni fni AEF24382.1 AEF24382.1 AEF22364.1 AEF22364.1 AEF22358.1 AEF22358.1 AEF24389.1 AEF24389.1 AEF20912.1 AEF20912.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
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Coexpression
Experiments
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Textmining
[Homology]
Score
AEF22362.1KEGG: psa:PST_3873 phytoene desaturase; TIGRFAM: Zeta-phytoene desaturase; PFAM: Amine oxidase. (496 aa)    
Predicted Functional Partners:
AEF22363.1
KEGG: ctu:Ctu_35440 phytoene synthase; PFAM: Squalene/phytoene synthase.
 
 
 0.999
AEF22361.1
Lycopene cyclase; KEGG: esa:ESA_00344 hypothetical protein; TIGRFAM: Lycopene cyclase; Lycopene cyclase, beta/epsilon; PFAM: Lycopene cyclase-type, FAD-binding.
 
 
 0.996
AEF22337.1
All-trans-retinol 13,14-reductase; KEGG: lbf:LBF_0864 phytoene dehydrogenase-like protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal.
  
  
 
0.928
AEF22360.1
Glycosyltransferase, MGT family; KEGG: psa:PST_3875 zeaxanthin glucosyl transferase; TIGRFAM: UDP-glycosyltransferase, MGT; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; Belongs to the UDP-glycosyltransferase family.
 
   
 0.856
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
 
  
 0.850
AEF24382.1
Magnesium chelatase; PFAM: ATPase, AAA-5; KEGG: pmy:Pmen_4585 protoporphyrin IX magnesium-chelatase; SMART: ATPase, AAA+ type, core.
 
  
 0.811
AEF22364.1
PFAM: Fatty acid hydroxylase; KEGG: psa:PST_3871 beta-carotene hydroxylase.
 
   
 0.735
AEF22358.1
PFAM: Polyprenyl synthetase; KEGG: esa:ESA_00347 hypothetical protein; Belongs to the FPP/GGPP synthase family.
  
  
 0.618
AEF24389.1
TIGRFAM: Cobaltochelatase, CobN subunit; KEGG: pmy:Pmen_4586 cobaltochelatase subunit CobN; PFAM: CobN/magnesium chelatase.
 
  
 0.504
AEF20912.1
KEGG: pfs:PFLU0750 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal.
 
  
 0.503
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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