STRINGSTRING
AEF22493.1 AEF22493.1 tolB tolB AEF23385.1 AEF23385.1 AEF21951.1 AEF21951.1 AEF22827.1 AEF22827.1 AEF22831.1 AEF22831.1 AEF22038.1 AEF22038.1 AEF22495.1 AEF22495.1 bamA bamA AEF22494.1 AEF22494.1 AEF23201.1 AEF23201.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEF22493.1OmpF family protein; PFAM: Outer membrane porin F; Outer membrane protein, OmpA/MotB, C-terminal; KEGG: pmy:Pmen_2092 OmpF family protein. (326 aa)    
Predicted Functional Partners:
tolB
Protein tolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.776
AEF23385.1
KEGG: pmy:Pmen_3044 outer membrane chaperone Skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH).
 
 
 0.705
AEF21951.1
KEGG: pmy:Pmen_3229 hypothetical protein; TIGRFAM: Polyphosphate:AMP phosphotransferase; PFAM: Polyphosphate kinase-2-related.
   
    0.668
AEF22827.1
KEGG: pmy:Pmen_2605 cbb3-type cytochrome c oxidase subunit II; TIGRFAM: Cytochrome c oxidase, monohaem subunit/FixO; PFAM: Cytochrome c oxidase, monohaem subunit/FixO.
  
   0.661
AEF22831.1
KEGG: pmy:Pmen_2605 cbb3-type cytochrome c oxidase subunit II; TIGRFAM: Cytochrome c oxidase, monohaem subunit/FixO; PFAM: Cytochrome c oxidase, monohaem subunit/FixO.
  
   0.661
AEF22038.1
PFAM: Porin, LamB type; KEGG: psa:PST_2436 maltoporin.
     
 0.649
AEF22495.1
PFAM: Conserved TM helix; Mechanosensitive ion channel MscS; KEGG: pmy:Pmen_2090 TM helix repeat-containing protein.
 
   
 0.610
bamA
Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.608
AEF22494.1
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: pfl:PFL_1875 RNA polymerase sigma factor SigX; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; Belongs to the sigma-70 factor family. ECF subfamily.
 
   
 0.606
AEF23201.1
Protease Do; Might be efficient in the degradation of transiently denatured and unfolded proteins which accumulate in the periplasm following stress conditions.
    
 
 0.590
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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