STRINGSTRING
AEF22507.1 AEF22507.1 prpB prpB AEF22505.1 AEF22505.1 AEF23784.1 AEF23784.1 AEF22504.1 AEF22504.1 AEF23570.1 AEF23570.1 AEF22503.1 AEF22503.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF22507.1KEGG: pmy:Pmen_2079 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR. (239 aa)    
Predicted Functional Partners:
prpB
Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
 
  
 0.834
AEF22505.1
TIGRFAM: 2-methylcitrate synthase/citrate synthase type I; KEGG: pmy:Pmen_2081 methylcitrate synthase; PFAM: Citrate synthase-like; Belongs to the citrate synthase family.
 
    0.727
AEF23784.1
GntR domain protein; KEGG: pst:PSPTO_3254 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR.
 
  
 0.720
AEF22504.1
TIGRFAM: 2-methylisocitrate dehydratase AcnD, Fe/S-dependent; KEGG: pmy:Pmen_2082 aconitate hydratase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel.
  
    0.703
AEF23570.1
Regulatory protein GntR HTH; KEGG: pmy:Pmen_3633 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal.
 
  
 0.697
AEF22503.1
AcnD-accessory protein PrpF; KEGG: pmy:Pmen_2083 methylitaconate delta2-delta3-isomerase; TIGRFAM: PrpF, AcnD-accessory; PFAM: PrpF protein.
 
    0.561
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.