Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF22585.1 | AEF22586.1 | Psefu_2620 | Psefu_2621 | KEGG: pmy:Pmen_2651 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein. | KEGG: psb:Psyr_1179 OPT superfamily oligopeptide transporter; TIGRFAM: Oligopeptide transporter OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily. | 0.558 |
AEF22586.1 | AEF22585.1 | Psefu_2621 | Psefu_2620 | KEGG: psb:Psyr_1179 OPT superfamily oligopeptide transporter; TIGRFAM: Oligopeptide transporter OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily. | KEGG: pmy:Pmen_2651 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein. | 0.558 |
AEF22586.1 | AEF23095.1 | Psefu_2621 | Psefu_3132 | KEGG: psb:Psyr_1179 OPT superfamily oligopeptide transporter; TIGRFAM: Oligopeptide transporter OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily. | TIGRFAM: Arginine N-succinyltransferase AstA; Arginine N-succinyltransferase Ast/AOST; KEGG: pmy:Pmen_2909 arginine succinyltransferase; PFAM: Arginine N-succinyltransferase Ast/AOST. | 0.440 |
AEF22586.1 | astD | Psefu_2621 | Psefu_3131 | KEGG: psb:Psyr_1179 OPT superfamily oligopeptide transporter; TIGRFAM: Oligopeptide transporter OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily. | N-succinylglutamate 5-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | 0.431 |
AEF22586.1 | atpB | Psefu_2621 | Psefu_4484 | KEGG: psb:Psyr_1179 OPT superfamily oligopeptide transporter; TIGRFAM: Oligopeptide transporter OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily. | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.429 |
AEF23095.1 | AEF22586.1 | Psefu_3132 | Psefu_2621 | TIGRFAM: Arginine N-succinyltransferase AstA; Arginine N-succinyltransferase Ast/AOST; KEGG: pmy:Pmen_2909 arginine succinyltransferase; PFAM: Arginine N-succinyltransferase Ast/AOST. | KEGG: psb:Psyr_1179 OPT superfamily oligopeptide transporter; TIGRFAM: Oligopeptide transporter OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily. | 0.440 |
AEF23095.1 | astD | Psefu_3132 | Psefu_3131 | TIGRFAM: Arginine N-succinyltransferase AstA; Arginine N-succinyltransferase Ast/AOST; KEGG: pmy:Pmen_2909 arginine succinyltransferase; PFAM: Arginine N-succinyltransferase Ast/AOST. | N-succinylglutamate 5-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | 0.981 |
astD | AEF22586.1 | Psefu_3131 | Psefu_2621 | N-succinylglutamate 5-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | KEGG: psb:Psyr_1179 OPT superfamily oligopeptide transporter; TIGRFAM: Oligopeptide transporter OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily. | 0.431 |
astD | AEF23095.1 | Psefu_3131 | Psefu_3132 | N-succinylglutamate 5-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | TIGRFAM: Arginine N-succinyltransferase AstA; Arginine N-succinyltransferase Ast/AOST; KEGG: pmy:Pmen_2909 arginine succinyltransferase; PFAM: Arginine N-succinyltransferase Ast/AOST. | 0.981 |
atpB | AEF22586.1 | Psefu_4484 | Psefu_2621 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | KEGG: psb:Psyr_1179 OPT superfamily oligopeptide transporter; TIGRFAM: Oligopeptide transporter OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily. | 0.429 |