STRINGSTRING
lolD lolD AEF22855.1 AEF22855.1 AEF22857.1 AEF22857.1 lolA lolA AEF20655.1 AEF20655.1 AEF20247.1 AEF20247.1 rpsK rpsK rsmA rsmA tsaD tsaD AEF22854.1 AEF22854.1 AEF22858.1 AEF22858.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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lolDLipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (233 aa)    
Predicted Functional Partners:
AEF22855.1
KEGG: psb:Psyr_1906 hypothetical protein; TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Domain of unknown function DUF214, ABC transporter permease.
 
 0.996
AEF22857.1
KEGG: psp:PSPPH_1859 lipoprotein releasing system transmembrane protein LolC; TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Domain of unknown function DUF214, ABC transporter permease.
 
 0.991
lolA
Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.792
AEF20655.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: pag:PLES_09121 putative permease.
  
 
 0.732
AEF20247.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: pmy:Pmen_2311 hypothetical protein.
  
 
 0.704
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
 
   
 0.702
rsmA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
 
 
 
 0.640
tsaD
O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
    0.635
AEF22854.1
TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; Beta-lactamase-like; KEGG: pmy:Pmen_1611 DNA internalization-related competence protein ComEC/Rec2; SMART: Beta-lactamase-like.
       0.620
AEF22858.1
PFAM: Type IV pilus assembly PilZ; KEGG: pmy:Pmen_1606 type IV pilus assembly PilZ.
       0.611
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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