STRINGSTRING
AEF22899.1 AEF22899.1 AEF22904.1 AEF22904.1 AEF23385.1 AEF23385.1 AEF22898.1 AEF22898.1 AEF22897.1 AEF22897.1 rplX rplX rplY rplY secA secA rplW rplW AEF22493.1 AEF22493.1 rpsN rpsN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEF22899.1KEGG: pmy:Pmen_2977 hypothetical protein. (202 aa)    
Predicted Functional Partners:
AEF22904.1
KEGG: pmy:Pmen_2983 periplasmic nitrate reductase subunit NapC; TIGRFAM: Periplasmic nitrate reductase c-type cytochrome, NapC/NirT; PFAM: NapC/NirT cytochrome c, N-terminal.
  
 
 0.781
AEF23385.1
KEGG: pmy:Pmen_3044 outer membrane chaperone Skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH).
    
 
 0.702
AEF22898.1
Two component transcriptional regulator, winged helix family; KEGG: pap:PSPA7_4200 two-component response regulator PhoP; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal.
  
  
 0.663
AEF22897.1
KEGG: pag:PLES_41411 two-component sensor PhoQ; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain.
  
  
 0.662
rplX
Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
   
 
 0.587
rplY
50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
  
   0.569
secA
Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.
    
 
 0.556
rplW
Ribosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.
    
 
 0.550
AEF22493.1
OmpF family protein; PFAM: Outer membrane porin F; Outer membrane protein, OmpA/MotB, C-terminal; KEGG: pmy:Pmen_2092 OmpF family protein.
  
 
 0.545
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
   
 
 0.536
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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