Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF22929.1 | AEF22930.1 | Psefu_2965 | Psefu_2966 | KEGG: psa:PST_1591 hypothetical protein. | 6-aminohexanoate-dimer hydrolase; KEGG: pap:PSPA7_6344 hypothetical protein; PFAM: Beta-lactamase-related. | 0.533 |
AEF22929.1 | AEF22931.1 | Psefu_2965 | Psefu_2967 | KEGG: psa:PST_1591 hypothetical protein. | KEGG: psa:PST_1450 hypothetical protein. | 0.437 |
AEF22930.1 | AEF22929.1 | Psefu_2966 | Psefu_2965 | 6-aminohexanoate-dimer hydrolase; KEGG: pap:PSPA7_6344 hypothetical protein; PFAM: Beta-lactamase-related. | KEGG: psa:PST_1591 hypothetical protein. | 0.533 |
AEF22930.1 | AEF22931.1 | Psefu_2966 | Psefu_2967 | 6-aminohexanoate-dimer hydrolase; KEGG: pap:PSPA7_6344 hypothetical protein; PFAM: Beta-lactamase-related. | KEGG: psa:PST_1450 hypothetical protein. | 0.545 |
AEF22931.1 | AEF22929.1 | Psefu_2967 | Psefu_2965 | KEGG: psa:PST_1450 hypothetical protein. | KEGG: psa:PST_1591 hypothetical protein. | 0.437 |
AEF22931.1 | AEF22930.1 | Psefu_2967 | Psefu_2966 | KEGG: psa:PST_1450 hypothetical protein. | 6-aminohexanoate-dimer hydrolase; KEGG: pap:PSPA7_6344 hypothetical protein; PFAM: Beta-lactamase-related. | 0.545 |
AEF22931.1 | AEF22932.1 | Psefu_2967 | Psefu_2968 | KEGG: psa:PST_1450 hypothetical protein. | UPF0082 protein yeeN; TIGRFAM: Protein of unknown function DUF28; HAMAP: Protein of unknown function DUF28; KEGG: pmy:Pmen_3178 hypothetical protein; PFAM: Protein of unknown function DUF28. | 0.500 |
AEF22932.1 | AEF22931.1 | Psefu_2968 | Psefu_2967 | UPF0082 protein yeeN; TIGRFAM: Protein of unknown function DUF28; HAMAP: Protein of unknown function DUF28; KEGG: pmy:Pmen_3178 hypothetical protein; PFAM: Protein of unknown function DUF28. | KEGG: psa:PST_1450 hypothetical protein. | 0.500 |