STRINGSTRING
AEF23174.1 AEF23174.1 AEF23175.1 AEF23175.1 cmk cmk AEF23176.1 AEF23176.1 AEF23170.1 AEF23170.1 AEF23171.1 AEF23171.1 AEF23169.1 AEF23169.1 AEF20174.1 AEF20174.1 AEF20255.1 AEF20255.1 AEF22485.1 AEF22485.1 AEF23172.1 AEF23172.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AEF23174.1KEGG: pfl:PFL_1245 S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4. (236 aa)    
Predicted Functional Partners:
AEF23175.1
PFAM: Domain of unknown function DUF1456; KEGG: psb:Psyr_1389 hypothetical protein.
 
     0.689
cmk
PFAM: Cytidylate kinase domain; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: pmy:Pmen_1853 cytidylate kinase.
  
  
 0.649
AEF23176.1
Uncharacterized protein family UPF0066; KEGG: pmy:Pmen_1705 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0066; PFAM: Uncharacterised protein family UPF0066.
  
    0.649
AEF23170.1
Inner-membrane translocator; PFAM: ABC transporter permease; KEGG: pau:PA14_50540 leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.
       0.576
AEF23171.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: pag:PLES_42511 leucine/isoleucine/valine transporter ATP-binding subunit; SMART: ATPase, AAA+ type, core.
       0.576
AEF23169.1
Inner-membrane translocator; PFAM: ABC transporter permease; KEGG: pag:PLES_42491 branched-chain amino acid transport protein BraD; Belongs to the binding-protein-dependent transport system permease family.
       0.556
AEF20174.1
KEGG: pmy:Pmen_4384 exodeoxyribonuclease III Xth; TIGRFAM: Exodeoxyribonuclease III xth; PFAM: Endonuclease/exonuclease/phosphatase.
  
    0.546
AEF20255.1
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: syd:Syncc9605_0661 exodeoxyribonuclease III.
  
    0.546
AEF22485.1
Exodeoxyribonuclease III; TIGRFAM: AP endonuclease, family 1; Exodeoxyribonuclease III xth; KEGG: pap:PSPA7_2692 exonuclease III; PFAM: Endonuclease/exonuclease/phosphatase.
  
    0.546
AEF23172.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmy:Pmen_1383 ABC transporter related; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
       0.540
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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