node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF19989.1 | AEF20174.1 | Psefu_0002 | Psefu_0188 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | KEGG: pmy:Pmen_4384 exodeoxyribonuclease III Xth; TIGRFAM: Exodeoxyribonuclease III xth; PFAM: Endonuclease/exonuclease/phosphatase. | 0.672 |
AEF19989.1 | AEF20255.1 | Psefu_0002 | Psefu_0271 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | PFAM: Endonuclease/exonuclease/phosphatase; KEGG: syd:Syncc9605_0661 exodeoxyribonuclease III. | 0.672 |
AEF19989.1 | polA | Psefu_0002 | Psefu_4313 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.998 |
AEF19989.1 | ung | Psefu_0002 | Psefu_3256 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.709 |
AEF20174.1 | AEF19989.1 | Psefu_0188 | Psefu_0002 | KEGG: pmy:Pmen_4384 exodeoxyribonuclease III Xth; TIGRFAM: Exodeoxyribonuclease III xth; PFAM: Endonuclease/exonuclease/phosphatase. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.672 |
AEF20174.1 | nth | Psefu_0188 | Psefu_3368 | KEGG: pmy:Pmen_4384 exodeoxyribonuclease III Xth; TIGRFAM: Exodeoxyribonuclease III xth; PFAM: Endonuclease/exonuclease/phosphatase. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.944 |
AEF20174.1 | polA | Psefu_0188 | Psefu_4313 | KEGG: pmy:Pmen_4384 exodeoxyribonuclease III Xth; TIGRFAM: Exodeoxyribonuclease III xth; PFAM: Endonuclease/exonuclease/phosphatase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.782 |
AEF20174.1 | ung | Psefu_0188 | Psefu_3256 | KEGG: pmy:Pmen_4384 exodeoxyribonuclease III Xth; TIGRFAM: Exodeoxyribonuclease III xth; PFAM: Endonuclease/exonuclease/phosphatase. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.526 |
AEF20255.1 | AEF19989.1 | Psefu_0271 | Psefu_0002 | PFAM: Endonuclease/exonuclease/phosphatase; KEGG: syd:Syncc9605_0661 exodeoxyribonuclease III. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.672 |
AEF20255.1 | nth | Psefu_0271 | Psefu_3368 | PFAM: Endonuclease/exonuclease/phosphatase; KEGG: syd:Syncc9605_0661 exodeoxyribonuclease III. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.522 |
AEF20255.1 | polA | Psefu_0271 | Psefu_4313 | PFAM: Endonuclease/exonuclease/phosphatase; KEGG: syd:Syncc9605_0661 exodeoxyribonuclease III. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.782 |
AEF20255.1 | ung | Psefu_0271 | Psefu_3256 | PFAM: Endonuclease/exonuclease/phosphatase; KEGG: syd:Syncc9605_0661 exodeoxyribonuclease III. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.526 |
AEF23219.1 | AEF23220.1 | Psefu_3257 | Psefu_3258 | PFAM: Extracellular ligand-binding receptor; KEGG: pmy:Pmen_1376 extracellular ligand-binding receptor. | PFAM: Crotonase, core; KEGG: pmy:Pmen_1374 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.727 |
AEF23219.1 | AEF23221.1 | Psefu_3257 | Psefu_3259 | PFAM: Extracellular ligand-binding receptor; KEGG: pmy:Pmen_1376 extracellular ligand-binding receptor. | 3-hydroxyisobutyryl-CoA hydrolase; KEGG: pmy:Pmen_1373 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core. | 0.650 |
AEF23219.1 | ung | Psefu_3257 | Psefu_3256 | PFAM: Extracellular ligand-binding receptor; KEGG: pmy:Pmen_1376 extracellular ligand-binding receptor. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.602 |
AEF23220.1 | AEF23219.1 | Psefu_3258 | Psefu_3257 | PFAM: Crotonase, core; KEGG: pmy:Pmen_1374 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | PFAM: Extracellular ligand-binding receptor; KEGG: pmy:Pmen_1376 extracellular ligand-binding receptor. | 0.727 |
AEF23220.1 | AEF23221.1 | Psefu_3258 | Psefu_3259 | PFAM: Crotonase, core; KEGG: pmy:Pmen_1374 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyisobutyryl-CoA hydrolase; KEGG: pmy:Pmen_1373 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core. | 0.953 |
AEF23220.1 | ung | Psefu_3258 | Psefu_3256 | PFAM: Crotonase, core; KEGG: pmy:Pmen_1374 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.534 |
AEF23221.1 | AEF23219.1 | Psefu_3259 | Psefu_3257 | 3-hydroxyisobutyryl-CoA hydrolase; KEGG: pmy:Pmen_1373 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core. | PFAM: Extracellular ligand-binding receptor; KEGG: pmy:Pmen_1376 extracellular ligand-binding receptor. | 0.650 |
AEF23221.1 | AEF23220.1 | Psefu_3259 | Psefu_3258 | 3-hydroxyisobutyryl-CoA hydrolase; KEGG: pmy:Pmen_1373 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core. | PFAM: Crotonase, core; KEGG: pmy:Pmen_1374 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.953 |