STRINGSTRING
AEF23238.1 AEF23238.1 AEF23239.1 AEF23239.1 AEF23237.1 AEF23237.1 AEF23236.1 AEF23236.1 AEF23240.1 AEF23240.1 AEF23231.1 AEF23231.1 AEF23232.1 AEF23232.1 AEF23233.1 AEF23233.1 AEF23234.1 AEF23234.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Experiments
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[Homology]
Score
AEF23238.1KEGG: pmy:Pmen_1356 hypothetical protein. (72 aa)    
Predicted Functional Partners:
AEF23239.1
TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: pmy:Pmen_1355 ribosomal small subunit pseudouridine synthase A; SMART: RNA-binding S4; Belongs to the pseudouridine synthase RsuA family.
  
    0.847
AEF23237.1
TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: pmy:Pmen_1357 diguanylate cyclase; SMART: Diguanylate cyclase, predicted.
       0.773
AEF23236.1
Urea carboxylase; SMART: Allophanate hydrolase subunit 2; Biotin carboxylase, C-terminal; Allophanate hydrolase subunit 1; TIGRFAM: Urea carboxylase; Allophanate hydrolase subunit 2; KEGG: pmy:Pmen_1358 biotin carboxylation domain-containing protein; PFAM: Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Allophanate hydrolase subunit 1; Biotin/lipoyl attachment.
  
    0.586
AEF23240.1
KEGG: pmy:Pmen_1354 alpha/beta hydrolase fold.
     
 0.474
AEF23231.1
PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pmy:Pmen_1365 binding-protein-dependent transport systems inner membrane component.
       0.456
AEF23232.1
Polyamine-transporting ATPase; PFAM: ABC transporter-like; KEGG: pfo:Pfl01_1341 ABC transporter-like; SMART: ATPase, AAA+ type, core.
  
    0.456
AEF23233.1
KEGG: psa:PST_2009 hypothetical protein; TIGRFAM: Urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989.
       0.456
AEF23234.1
KEGG: pmy:Pmen_1359 hypothetical protein; TIGRFAM: Urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989.
       0.452
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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