node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF21977.1 | AEF23389.1 | Psefu_2006 | Psefu_3427 | TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: pmy:Pmen_1841 ribosomal large subunit pseudouridine synthase B; SMART: RNA-binding S4; Belongs to the pseudouridine synthase RsuA family. | PFAM: Phosphatidate cytidylyltransferase; KEGG: pmy:Pmen_3048 phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.457 |
AEF21977.1 | cmk | Psefu_2006 | Psefu_2021 | TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: pmy:Pmen_1841 ribosomal large subunit pseudouridine synthase B; SMART: RNA-binding S4; Belongs to the pseudouridine synthase RsuA family. | PFAM: Cytidylate kinase domain; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: pmy:Pmen_1853 cytidylate kinase. | 0.760 |
AEF21977.1 | der | Psefu_2006 | Psefu_3288 | TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: pmy:Pmen_1841 ribosomal large subunit pseudouridine synthase B; SMART: RNA-binding S4; Belongs to the pseudouridine synthase RsuA family. | GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.807 |
AEF23389.1 | AEF21977.1 | Psefu_3427 | Psefu_2006 | PFAM: Phosphatidate cytidylyltransferase; KEGG: pmy:Pmen_3048 phosphatidate cytidylyltransferase; Belongs to the CDS family. | TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: pmy:Pmen_1841 ribosomal large subunit pseudouridine synthase B; SMART: RNA-binding S4; Belongs to the pseudouridine synthase RsuA family. | 0.457 |
AEF23389.1 | cmk | Psefu_3427 | Psefu_2021 | PFAM: Phosphatidate cytidylyltransferase; KEGG: pmy:Pmen_3048 phosphatidate cytidylyltransferase; Belongs to the CDS family. | PFAM: Cytidylate kinase domain; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: pmy:Pmen_1853 cytidylate kinase. | 0.643 |
AEF23389.1 | der | Psefu_3427 | Psefu_3288 | PFAM: Phosphatidate cytidylyltransferase; KEGG: pmy:Pmen_3048 phosphatidate cytidylyltransferase; Belongs to the CDS family. | GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.693 |
AEF23389.1 | ffh | Psefu_3427 | Psefu_1041 | PFAM: Phosphatidate cytidylyltransferase; KEGG: pmy:Pmen_3048 phosphatidate cytidylyltransferase; Belongs to the CDS family. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...] | 0.599 |
AEF23389.1 | ftsY | Psefu_3427 | Psefu_0177 | PFAM: Phosphatidate cytidylyltransferase; KEGG: pmy:Pmen_3048 phosphatidate cytidylyltransferase; Belongs to the CDS family. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. | 0.521 |
AEF23389.1 | gpsA | Psefu_3427 | Psefu_2583 | PFAM: Phosphatidate cytidylyltransferase; KEGG: pmy:Pmen_3048 phosphatidate cytidylyltransferase; Belongs to the CDS family. | KEGG: pfs:PFLU1840 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; HAMAP: Glycerol-3-phosphate dehydrogenase, NAD-dependent; PFAM: Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal; Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.498 |
AEF23850.1 | der | Psefu_3894 | Psefu_3288 | KEGG: pfl:PFL_0388 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal. | GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.775 |
bamB | der | Psefu_3289 | Psefu_3288 | Outer membrane assembly lipoprotein YfgL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.731 |
cmk | AEF21977.1 | Psefu_2021 | Psefu_2006 | PFAM: Cytidylate kinase domain; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: pmy:Pmen_1853 cytidylate kinase. | TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: pmy:Pmen_1841 ribosomal large subunit pseudouridine synthase B; SMART: RNA-binding S4; Belongs to the pseudouridine synthase RsuA family. | 0.760 |
cmk | AEF23389.1 | Psefu_2021 | Psefu_3427 | PFAM: Cytidylate kinase domain; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: pmy:Pmen_1853 cytidylate kinase. | PFAM: Phosphatidate cytidylyltransferase; KEGG: pmy:Pmen_3048 phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.643 |
cmk | der | Psefu_2021 | Psefu_3288 | PFAM: Cytidylate kinase domain; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: pmy:Pmen_1853 cytidylate kinase. | GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.988 |
cmk | ffh | Psefu_2021 | Psefu_1041 | PFAM: Cytidylate kinase domain; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: pmy:Pmen_1853 cytidylate kinase. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...] | 0.782 |
cmk | ftsY | Psefu_2021 | Psefu_0177 | PFAM: Cytidylate kinase domain; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: pmy:Pmen_1853 cytidylate kinase. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. | 0.550 |
cmk | gpsA | Psefu_2021 | Psefu_2583 | PFAM: Cytidylate kinase domain; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: pmy:Pmen_1853 cytidylate kinase. | KEGG: pfs:PFLU1840 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; HAMAP: Glycerol-3-phosphate dehydrogenase, NAD-dependent; PFAM: Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal; Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.571 |
der | AEF21977.1 | Psefu_3288 | Psefu_2006 | GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: pmy:Pmen_1841 ribosomal large subunit pseudouridine synthase B; SMART: RNA-binding S4; Belongs to the pseudouridine synthase RsuA family. | 0.807 |
der | AEF23389.1 | Psefu_3288 | Psefu_3427 | GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | PFAM: Phosphatidate cytidylyltransferase; KEGG: pmy:Pmen_3048 phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.693 |
der | AEF23850.1 | Psefu_3288 | Psefu_3894 | GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | KEGG: pfl:PFL_0388 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal. | 0.775 |