STRINGSTRING
AEF23295.1 AEF23295.1 AEF20908.1 AEF20908.1 bamA bamA AEF21835.1 AEF21835.1 AEF22899.1 AEF22899.1 AEF23296.1 AEF23296.1 AEF21522.1 AEF21522.1 AEF23300.1 AEF23300.1 bamE bamE AEF21943.1 AEF21943.1 ihfA ihfA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Textmining
[Homology]
Score
AEF23295.1PFAM: Rickettsia 17kDa surface antigen; KEGG: ppw:PputW619_1151 17 kDa surface antigen. (154 aa)    
Predicted Functional Partners:
AEF20908.1
Lipid A 3-O-deacylase-related protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family.
  
  
 0.701
bamA
Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 
 0.679
AEF21835.1
PFAM: Protein of unknown function DUF883, ElaB; KEGG: psb:Psyr_2118 hypothetical protein.
  
    0.590
AEF22899.1
KEGG: pmy:Pmen_2977 hypothetical protein.
   
  
 0.535
AEF23296.1
TIGRFAM: Glycerate kinase; KEGG: pag:PLES_42711 putative glycerate kinase; PFAM: Glycerate kinase; Belongs to the glycerate kinase type-1 family.
       0.532
AEF21522.1
KEGG: pmy:Pmen_1664 hypothetical protein.
  
  
 0.531
AEF23300.1
PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: ppw:PputW619_1149 OmpA/MotB domain-containing protein.
 
  
 0.518
bamE
SmpA/OmlA domain-containing protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
  
 0.486
AEF21943.1
Protein of unknown function UPF0270; PFAM: Uncharacterised protein family UPF0270; KEGG: pmy:Pmen_2959 hypothetical protein; Belongs to the UPF0270 family.
  
     0.437
ihfA
Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
   
    0.426
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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