STRINGSTRING
AEF23300.1 AEF23300.1 AEF23307.1 AEF23307.1 pdxH pdxH AEF23301.1 AEF23301.1 AEF23603.1 AEF23603.1 tolB tolB AEF23298.1 AEF23298.1 AEF23295.1 AEF23295.1 AEF23302.1 AEF23302.1 AEF20241.1 AEF20241.1 AEF23385.1 AEF23385.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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[Homology]
Score
AEF23300.1PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: ppw:PputW619_1149 OmpA/MotB domain-containing protein. (283 aa)    
Predicted Functional Partners:
AEF23307.1
PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: pmy:Pmen_1422 OmpA/MotB domain-containing protein.
  
     0.718
pdxH
Pyridoxine/pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
       0.677
AEF23301.1
PFAM: Beta-lactamase-related; KEGG: pmy:Pmen_1434 beta-lactamase.
 
     0.619
AEF23603.1
PFAM: Peptidase M4, propeptide, PepSY; PepSY-associated TM helix; KEGG: pfs:PFLU0594 hypothetical protein.
      
 0.595
tolB
Protein tolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.580
AEF23298.1
Transcriptional regulator, CdaR; PFAM: Putative sugar diacid recognition; Helix-turn-helix, Fis-type; KEGG: pmy:Pmen_1437 CdaR family transcriptional regulator.
       0.550
AEF23295.1
PFAM: Rickettsia 17kDa surface antigen; KEGG: ppw:PputW619_1151 17 kDa surface antigen.
 
  
 0.518
AEF23302.1
Beta-agarase; KEGG: avn:Avin_19460 agarase.
       0.502
AEF20241.1
KEGG: pap:PSPA7_0149 hypothetical protein; TIGRFAM: Type IV / VI secretion system, DotU; Type VI secretion system, OmpA/MotB; PFAM: Type IV / VI secretion system, DotU; Outer membrane protein, OmpA/MotB, C-terminal.
 
 
 0.497
AEF23385.1
KEGG: pmy:Pmen_3044 outer membrane chaperone Skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH).
 
 
 0.487
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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