STRINGSTRING
AEF23361.1 AEF23361.1 AEF20254.1 AEF20254.1 AEF21388.1 AEF21388.1 AEF20165.1 AEF20165.1 surE surE rpoS rpoS pcm pcm AEF23362.1 AEF23362.1 AEF24064.1 AEF24064.1 AEF22340.1 AEF22340.1 truD truD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
AEF23361.1Peptidase M23; KEGG: pmy:Pmen_3021 peptidase M23B; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup. (285 aa)    
Predicted Functional Partners:
AEF20254.1
PFAM: Peptidase M23; KEGG: pmy:Pmen_0185 peptidase M23B.
 
  
 0.818
AEF21388.1
PFAM: Peptidase M23; KEGG: pmy:Pmen_3491 peptidase M23B.
 
  
 0.810
AEF20165.1
Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.797
surE
Multifunctional protein surE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
 
  
 0.766
rpoS
RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.
  
  
 0.747
pcm
Protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
     
 0.732
AEF23362.1
PFAM: Protein of unknown function DUF368; KEGG: psa:PST_1570 hypothetical protein.
       0.683
AEF24064.1
Cell wall hydrolase/autolysin; KEGG: pmy:Pmen_0632 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding lysin domain; SMART: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding Lysin subgroup.
 
  
 0.661
AEF22340.1
Cell wall hydrolase/autolysin; KEGG: avn:Avin_29220 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic.
 
  
 0.653
truD
tRNA pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.
       0.653
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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