STRINGSTRING
AEF23404.1 AEF23404.1 AEF23402.1 AEF23402.1 AEF21599.1 AEF21599.1 AEF23405.1 AEF23405.1 AEF23406.1 AEF23406.1 AEF21360.1 AEF21360.1 AEF22767.1 AEF22767.1 AEF20528.1 AEF20528.1 AEF20986.1 AEF20986.1 AEF22765.1 AEF22765.1 AEF20765.1 AEF20765.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF23404.1PFAM: Stress-induced protein, KGG, repeat; KEGG: pmy:Pmen_2359 hypothetical protein. (56 aa)    
Predicted Functional Partners:
AEF23402.1
PFAM: Protein of unknown function DUF892; KEGG: pmy:Pmen_2257 hypothetical protein.
 
  
 0.826
AEF21599.1
PFAM: Protein of unknown function DUF892; KEGG: pag:PLES_31411 hypothetical protein.
 
  
 0.820
AEF23405.1
KEGG: psa:PST_1217 outer membrane protein.
  
  
 0.699
AEF23406.1
PFAM: Protein of unknown function DUF1264; KEGG: ppf:Pput_1863 hypothetical protein.
 
     0.599
AEF21360.1
Regulatory protein TetR; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: avn:Avin_35780 TetR family regulatory protein.
  
     0.558
AEF22767.1
KEGG: psp:PSPPH_3196 hypothetical protein.
  
     0.532
AEF20528.1
PFAM: Protein of unknown function DUF1176; KEGG: pwa:Pecwa_2335 protein of unknown function DUF1176.
  
     0.527
AEF20986.1
PFAM: Protein of unknown function DUF1282; KEGG: yen:YE2135 hypothetical protein.
  
     0.487
AEF22765.1
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: psa:PST_2149 endonuclease/exonuclease/phosphatase family protein.
  
    0.466
AEF20765.1
CsbD family protein; PFAM: CsbD-like; KEGG: pmy:Pmen_3602 CsbD family protein; Belongs to the UPF0337 (CsbD) family.
   
  
 0.458
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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