STRINGSTRING
AEF23433.1 AEF23433.1 AEF23432.1 AEF23432.1 AEF23693.1 AEF23693.1 AEF24077.1 AEF24077.1 AEF21815.1 AEF21815.1 dapE dapE AEF21619.1 AEF21619.1 AEF23435.1 AEF23435.1 AEF22532.1 AEF22532.1 AEF23436.1 AEF23436.1 AEF21666.1 AEF21666.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
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textmining
co-expression
protein homology
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[Homology]
Score
AEF23433.1PFAM: Glycosyl transferase, family 2; Glycoside hydrolase, family 17; KEGG: avn:Avin_39140 glycosyl transferase, family 2. (869 aa)    
Predicted Functional Partners:
AEF23432.1
PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: pmy:Pmen_3064 UBA/ThiF-type NAD/FAD binding protein.
       0.585
AEF23693.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS fold-3; PAS fold; PAS fold-4; KEGG: pmy:Pmen_0760 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif.
  
  
 0.584
AEF24077.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver domain; PAS fold; KEGG: pmy:Pmen_0619 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; Signal transduction response regulator, receiver domain.
  
  
 0.584
AEF21815.1
KEGG: pmy:Pmen_2933 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat.
 
 
 0.568
dapE
Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.
     
 0.556
AEF21619.1
Diguanylate cyclase/phosphodiesterase with GAF sensor; KEGG: pst:PSPTO_4543 GAF domain/GGDEF domain/EAL domain protein; PFAM: Diguanylate phosphodiesterase, EAL domain; GAF; SMART: Diguanylate phosphodiesterase, EAL domain; GAF; Diguanylate cyclase, predicted.
  
  
 0.548
AEF23435.1
KEGG: pmy:Pmen_3067 rRNA (guanine-N(1)-)-methyltransferase; PFAM: Methyltransferase type 11.
  
    0.545
AEF22532.1
KEGG: pfl:PFL_4290 hypothetical protein; PFAM: CHAD; SMART: CHAD.
  
     0.543
AEF23436.1
KEGG: pmy:Pmen_3068 hypothetical protein.
       0.543
AEF21666.1
TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate glucose phosphotransferase, WcaJ; KEGG: pfo:Pfl01_2816 sugar transferase; PFAM: Bacterial sugar transferase.
  
  
 0.535
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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