STRINGSTRING
AEF23629.1 AEF23629.1 AEF23630.1 AEF23630.1 AEF23628.1 AEF23628.1 AEF23766.1 AEF23766.1 AEF23626.1 AEF23626.1 AEF23627.1 AEF23627.1 AEF23767.1 AEF23767.1 AEF23765.1 AEF23765.1 lptC lptC AEF23635.1 AEF23635.1 AEF23631.1 AEF23631.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEF23629.1Protein of unknown function DUF140; KEGG: pag:PLES_48341 putative permease of ABC transporter; TIGRFAM: Domain of unknown function DUF140; PFAM: Domain of unknown function DUF140. (265 aa)    
Predicted Functional Partners:
AEF23630.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmy:Pmen_0876 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 0.999
AEF23628.1
PFAM: Mammalian cell entry-related; KEGG: pmy:Pmen_0878 hypothetical protein.
 
 0.998
AEF23766.1
Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmy:Pmen_0372 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 0.983
AEF23626.1
KEGG: pag:PLES_48311 hypothetical protein.
  
 0.972
AEF23627.1
PFAM: Toluene tolerance Ttg2; KEGG: pmy:Pmen_0879 toluene tolerance family protein.
  
 
 0.970
AEF23767.1
PFAM: Mammalian cell entry-related; KEGG: pmy:Pmen_0371 hypothetical protein.
  
 0.953
AEF23765.1
KEGG: pmy:Pmen_0373 hypothetical protein; TIGRFAM: Domain of unknown function DUF140; PFAM: Domain of unknown function DUF140.
  
  
 
0.920
lptC
Protein of unknown function DUF1239; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA.
     
 0.816
AEF23635.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pfl:PFL_0916 ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core.
 
  
  0.765
AEF23631.1
KpsF/GutQ family protein; SMART: Cystathionine beta-synthase, core; TIGRFAM: KpsF/GutQ; KEGG: pmy:Pmen_0875 KpsF/GutQ family protein; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core.
 
     0.684
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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