Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF20339.1 | AEF23794.1 | Psefu_0355 | Psefu_3838 | PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: avn:Avin_05780 glutathione S-transferase-like protein; Belongs to the GST superfamily. | PFAM: NADPH-dependent FMN reductase; KEGG: pmy:Pmen_4056 NADPH-dependent FMN reductase. | 0.403 |
AEF23139.1 | AEF23794.1 | Psefu_3176 | Psefu_3838 | PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal; KEGG: pen:PSEEN2011 putative glutathione S-transferase YghU. | PFAM: NADPH-dependent FMN reductase; KEGG: pmy:Pmen_4056 NADPH-dependent FMN reductase. | 0.403 |
AEF23793.1 | AEF23794.1 | Psefu_3837 | Psefu_3838 | Protein of unknown function UPF0057; PFAM: Uncharacterised protein family UPF0057; KEGG: pfs:PFLU5603 hypothetical protein. | PFAM: NADPH-dependent FMN reductase; KEGG: pmy:Pmen_4056 NADPH-dependent FMN reductase. | 0.535 |
AEF23794.1 | AEF20339.1 | Psefu_3838 | Psefu_0355 | PFAM: NADPH-dependent FMN reductase; KEGG: pmy:Pmen_4056 NADPH-dependent FMN reductase. | PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: avn:Avin_05780 glutathione S-transferase-like protein; Belongs to the GST superfamily. | 0.403 |
AEF23794.1 | AEF23139.1 | Psefu_3838 | Psefu_3176 | PFAM: NADPH-dependent FMN reductase; KEGG: pmy:Pmen_4056 NADPH-dependent FMN reductase. | PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal; KEGG: pen:PSEEN2011 putative glutathione S-transferase YghU. | 0.403 |
AEF23794.1 | AEF23793.1 | Psefu_3838 | Psefu_3837 | PFAM: NADPH-dependent FMN reductase; KEGG: pmy:Pmen_4056 NADPH-dependent FMN reductase. | Protein of unknown function UPF0057; PFAM: Uncharacterised protein family UPF0057; KEGG: pfs:PFLU5603 hypothetical protein. | 0.535 |