STRINGSTRING
AEF23869.1 AEF23869.1 AEF23868.1 AEF23868.1 AEF23867.1 AEF23867.1 AEF24418.1 AEF24418.1 AEF23222.1 AEF23222.1 AEF22616.1 AEF22616.1 AEF24417.1 AEF24417.1 AEF23223.1 AEF23223.1 AEF23870.1 AEF23870.1 AEF21539.1 AEF21539.1 AEF20091.1 AEF20091.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AEF23869.1KEGG: ppg:PputGB1_3356 TolC family type I secretion outer membrane protein; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein. (440 aa)    
Predicted Functional Partners:
AEF23868.1
KEGG: app:CAP2UW1_2829 type I secretion membrane fusion protein, HlyD family; TIGRFAM: Type I secretion membrane fusion protein, HlyD; PFAM: Secretion protein HlyD.
 
 
 0.931
AEF23867.1
SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, type I secretion system, PrtD; KEGG: pol:Bpro_4928 type I secretion system ATPase, PrtD; PFAM: ABC transporter-like.
 
  
 0.889
AEF24418.1
KEGG: pag:PLES_34461 putative secretion protein; TIGRFAM: Type I secretion membrane fusion protein, HlyD; PFAM: Secretion protein HlyD.
 
 
 0.671
AEF23222.1
KEGG: pfo:Pfl01_0136 type I secretion membrane fusion protein, HlyD; TIGRFAM: Type I secretion membrane fusion protein, HlyD; PFAM: Secretion protein HlyD.
 
 
 0.665
AEF22616.1
PFAM: Secretion protein HlyD; KEGG: pap:PSPA7_5897 multidrug resistance protein.
  
 
 0.650
AEF24417.1
SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, type I secretion system; KEGG: pae:PA1876 probable ATP-binding/permease fusion ABC transporter; PFAM: ABC transporter-like.
 
  
 0.608
AEF23223.1
SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, type I secretion system; KEGG: pfo:Pfl01_0135 ABC transporter-like; PFAM: ABC transporter-like.
 
  
 0.604
AEF23870.1
PFAM: Methyltransferase type 11; KEGG: pnu:Pnuc_0320 methyltransferase type 11.
       0.586
AEF21539.1
PFAM: Secretion protein HlyD; KEGG: pmy:Pmen_1492 secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.579
AEF20091.1
Serralysin; PFAM: Peptidase M10, metallopeptidase; Haemolysin-type calcium-binding repeat; KEGG: pmy:Pmen_4542 serralysin; SMART: Peptidase, metallopeptidase.
 
  
 0.556
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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