STRINGSTRING
AEF24123.1 AEF24123.1 AEF24124.1 AEF24124.1 msbA msbA AEF20343.1 AEF20343.1 AEF23015.1 AEF23015.1 AEF22430.1 AEF22430.1 AEF24104.1 AEF24104.1 AEF23626.1 AEF23626.1 AEF20860.1 AEF20860.1 AEF24139.1 AEF24139.1 AEF22583.1 AEF22583.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
AEF24123.1LmbE family protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: pmy:Pmen_0596 LmbE family protein. (460 aa)    
Predicted Functional Partners:
AEF24124.1
Mig-14 family protein; PFAM: Mig-14; KEGG: pmy:Pmen_0595 Mig-14 family protein.
  
  
 0.874
msbA
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
 
     0.835
AEF20343.1
PFAM: Outer membrane porin, bacterial; KEGG: pmy:Pmen_1168 outer membrane porin.
  
     0.769
AEF23015.1
KEGG: pmy:Pmen_1318 hypothetical protein.
  
     0.768
AEF22430.1
PFAM: Outer membrane porin, bacterial; KEGG: pmy:Pmen_4332 outer membrane porin.
  
     0.765
AEF24104.1
PFAM: Protein of unknown function DUF330; KEGG: pfl:PFL_0549 hypothetical protein.
  
     0.761
AEF23626.1
KEGG: pag:PLES_48311 hypothetical protein.
  
     0.757
AEF20860.1
KEGG: pmy:Pmen_0990 hypothetical protein.
  
     0.747
AEF24139.1
PFAM: Lipopolysaccharide kinase; KEGG: pmy:Pmen_0583 lipopolysaccharide kinase.
 
     0.744
AEF22583.1
PFAM: Outer membrane porin, bacterial; KEGG: ppg:PputGB1_4239 outer membrane porin.
  
     0.741
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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