STRINGSTRING
AEF24139.1 AEF24139.1 AEF24138.1 AEF24138.1 AEF24137.1 AEF24137.1 AEF24136.1 AEF24136.1 AEF24141.1 AEF24141.1 infA infA AEF21101.1 AEF21101.1 rpsC rpsC rpsK rpsK rpsE rpsE AEF24134.1 AEF24134.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
AEF24139.1PFAM: Lipopolysaccharide kinase; KEGG: pmy:Pmen_0583 lipopolysaccharide kinase. (244 aa)    
Predicted Functional Partners:
AEF24138.1
PFAM: Lipopolysaccharide kinase; KEGG: pmy:Pmen_0584 lipopolysaccharide kinase.
 
 
 0.983
AEF24137.1
KEGG: pmy:Pmen_0585 hypothetical protein.
 
   
 0.958
AEF24136.1
PFAM: Carbamoyltransferase; KEGG: ppw:PputW619_0524 carbamoyltransferase.
 
   
 0.943
AEF24141.1
PFAM: Glycosyl transferase, group 1; KEGG: pap:PSPA7_5745 UDP-glucose:(heptosyl) LPS alpha 1,3-glucosyltransferase WaaG.
 
 
 0.905
infA
Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
  
 
 0.839
AEF21101.1
PFAM: Lipopolysaccharide kinase; KEGG: pmy:Pmen_2479 lipopolysaccharide kinase.
 
 
 0.834
rpsC
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
   
 0.824
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
    
 0.808
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
    
 0.807
AEF24134.1
KEGG: pag:PLES_53901 hypothetical protein.
  
 
 0.801
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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