STRINGSTRING
AEF24187.1 AEF24187.1 lcdH lcdH AEF24189.1 AEF24189.1 AEF24190.1 AEF24190.1 AEF24191.1 AEF24191.1 AEF21080.1 AEF21080.1 AEF20086.1 AEF20086.1 AEF21337.1 AEF21337.1 AEF22695.1 AEF22695.1 fadB fadB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEF24187.1KEGG: pmy:Pmen_0502 thioesterase-like protein. (154 aa)    
Predicted Functional Partners:
lcdH
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
   
 0.996
AEF24189.1
PFAM: Protein of unknown function DUF849, prokaryotic; KEGG: pag:PLES_57831 hypothetical protein.
 
  
 0.955
AEF24190.1
Choline ABC transporter, periplasmic binding protein; KEGG: pmy:Pmen_0499 substrate-binding region of ABC-type glycine betaine transport system; TIGRFAM: ABC transporter, choline, substrate-binding protein; PFAM: ABC-type glycine betaine transport system, substrate-binding domain.
 
   
 0.754
AEF24191.1
Transcriptional regulator, AraC family; KEGG: pmy:Pmen_0498 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; ThiJ/PfpI; SMART: Helix-turn-helix, AraC type, DNA binding domain.
 
   
 0.692
AEF21080.1
PFAM: Protein of unknown function DUF1185; KEGG: atu:Atu5223 hypothetical protein.
  
     0.537
AEF20086.1
PFAM: Protein of unknown function DUF1185; KEGG: ppw:PputW619_2259 hypothetical protein.
  
     0.526
AEF21337.1
Malonate decarboxylase, epsilon subunit; SMART: Polyketide synthase, acyl transferase domain; TIGRFAM: Malonate decarboxylase, epsilon subunit; KEGG: avn:Avin_10340 acyl-carrier-protein S-malonyltransferase; PFAM: Acyl transferase.
  
 
 0.469
AEF22695.1
SMART: Polyketide synthase, acyl transferase domain; TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; KEGG: pmy:Pmen_1627 [acyl-carrier-protein] S-malonyltransferase; PFAM: Acyl transferase.
  
 
 0.469
fadB
Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.421
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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