Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF24045.1 | AEF24208.1 | Psefu_4090 | Psefu_4256 | KEGG: pmy:Pmen_0682 molecular chaperone-like protein. | PFAM: Protein of unknown function DUF1234; KEGG: pmy:Pmen_4343 hypothetical protein. | 0.526 |
AEF24207.1 | AEF24208.1 | Psefu_4255 | Psefu_4256 | KEGG: pfl:PFL_0229 sigma-54-binding protein; PFAM: RNA polymerase sigma factor 54, interaction; SMART: ATPase, AAA+ type, core. | PFAM: Protein of unknown function DUF1234; KEGG: pmy:Pmen_4343 hypothetical protein. | 0.666 |
AEF24207.1 | AEF24209.1 | Psefu_4255 | Psefu_4257 | KEGG: pfl:PFL_0229 sigma-54-binding protein; PFAM: RNA polymerase sigma factor 54, interaction; SMART: ATPase, AAA+ type, core. | PFAM: Protein of unknown function DUF2292; KEGG: pmy:Pmen_4344 hypothetical protein. | 0.456 |
AEF24208.1 | AEF24045.1 | Psefu_4256 | Psefu_4090 | PFAM: Protein of unknown function DUF1234; KEGG: pmy:Pmen_4343 hypothetical protein. | KEGG: pmy:Pmen_0682 molecular chaperone-like protein. | 0.526 |
AEF24208.1 | AEF24207.1 | Psefu_4256 | Psefu_4255 | PFAM: Protein of unknown function DUF1234; KEGG: pmy:Pmen_4343 hypothetical protein. | KEGG: pfl:PFL_0229 sigma-54-binding protein; PFAM: RNA polymerase sigma factor 54, interaction; SMART: ATPase, AAA+ type, core. | 0.666 |
AEF24208.1 | AEF24209.1 | Psefu_4256 | Psefu_4257 | PFAM: Protein of unknown function DUF1234; KEGG: pmy:Pmen_4343 hypothetical protein. | PFAM: Protein of unknown function DUF2292; KEGG: pmy:Pmen_4344 hypothetical protein. | 0.551 |
AEF24208.1 | AEF24210.1 | Psefu_4256 | Psefu_4258 | PFAM: Protein of unknown function DUF1234; KEGG: pmy:Pmen_4343 hypothetical protein. | KEGG: pmy:Pmen_4345 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: Thiosulphate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1. | 0.442 |
AEF24209.1 | AEF24207.1 | Psefu_4257 | Psefu_4255 | PFAM: Protein of unknown function DUF2292; KEGG: pmy:Pmen_4344 hypothetical protein. | KEGG: pfl:PFL_0229 sigma-54-binding protein; PFAM: RNA polymerase sigma factor 54, interaction; SMART: ATPase, AAA+ type, core. | 0.456 |
AEF24209.1 | AEF24208.1 | Psefu_4257 | Psefu_4256 | PFAM: Protein of unknown function DUF2292; KEGG: pmy:Pmen_4344 hypothetical protein. | PFAM: Protein of unknown function DUF1234; KEGG: pmy:Pmen_4343 hypothetical protein. | 0.551 |
AEF24209.1 | AEF24210.1 | Psefu_4257 | Psefu_4258 | PFAM: Protein of unknown function DUF2292; KEGG: pmy:Pmen_4344 hypothetical protein. | KEGG: pmy:Pmen_4345 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: Thiosulphate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1. | 0.700 |
AEF24210.1 | AEF24208.1 | Psefu_4258 | Psefu_4256 | KEGG: pmy:Pmen_4345 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: Thiosulphate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1. | PFAM: Protein of unknown function DUF1234; KEGG: pmy:Pmen_4343 hypothetical protein. | 0.442 |
AEF24210.1 | AEF24209.1 | Psefu_4258 | Psefu_4257 | KEGG: pmy:Pmen_4345 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: Thiosulphate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1. | PFAM: Protein of unknown function DUF2292; KEGG: pmy:Pmen_4344 hypothetical protein. | 0.700 |